Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.39■□□□□ 0.53
CACNA1AO00555 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.39■□□□□ 0.53
CACNA1AO00555 AP006288.1-201ENST00000446065 395 ntBASIC18.39■□□□□ 0.53
CACNA1AO00555 COX20P2-201ENST00000452636 358 ntBASIC18.39■□□□□ 0.53
CACNA1AO00555 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.39■□□□□ 0.53
CACNA1AO00555 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.39■□□□□ 0.53
CACNA1AO00555 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.39■□□□□ 0.53
CACNA1AO00555 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.39■□□□□ 0.53
CACNA1AO00555 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.39■□□□□ 0.53
CACNA1AO00555 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.39■□□□□ 0.53
CACNA1AO00555 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.39■□□□□ 0.53
CACNA1AO00555 AL606495.2-201ENST00000605867 535 ntBASIC18.39■□□□□ 0.53
CACNA1AO00555 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.39■□□□□ 0.53
CACNA1AO00555 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CACNA1AO00555 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.38■□□□□ 0.53
CACNA1AO00555 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA1AO00555 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA1AO00555 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA1AO00555 AC011484.1-201ENST00000377652 1995 ntBASIC18.38■□□□□ 0.53
CACNA1AO00555 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA1AO00555 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CACNA1AO00555 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.38■□□□□ 0.53
CACNA1AO00555 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.38■□□□□ 0.53
CACNA1AO00555 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CACNA1AO00555 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.38■□□□□ 0.53
CACNA1AO00555 YBX2P1-201ENST00000394192 760 ntBASIC18.38■□□□□ 0.53
CACNA1AO00555 METTL21AP1-201ENST00000438852 635 ntBASIC18.38■□□□□ 0.53
CACNA1AO00555 DNAJB3-201ENST00000446806 729 ntBASIC18.38■□□□□ 0.53
CACNA1AO00555 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.38■□□□□ 0.53
CACNA1AO00555 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.38■□□□□ 0.53
CACNA1AO00555 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.38■□□□□ 0.53
CACNA1AO00555 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.38■□□□□ 0.53
CACNA1AO00555 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA1AO00555 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA1AO00555 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA1AO00555 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA1AO00555 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CACNA1AO00555 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA1AO00555 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CACNA1AO00555 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA1AO00555 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA1AO00555 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA1AO00555 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA1AO00555 AC018553.1-201ENST00000616682 1458 ntBASIC18.37■□□□□ 0.53
CACNA1AO00555 AC127496.7-201ENST00000625110 1798 ntBASIC18.37■□□□□ 0.53
CACNA1AO00555 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CACNA1AO00555 ECEL1P1-201ENST00000373592 1742 ntBASIC18.37■□□□□ 0.53
CACNA1AO00555 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CACNA1AO00555 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.37■□□□□ 0.53
CACNA1AO00555 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.37■□□□□ 0.53
CACNA1AO00555 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.37■□□□□ 0.53
CACNA1AO00555 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CACNA1AO00555 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CACNA1AO00555 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CACNA1AO00555 AC093909.1-201ENST00000504731 1122 ntBASIC18.37■□□□□ 0.53
CACNA1AO00555 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CACNA1AO00555 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CACNA1AO00555 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CACNA1AO00555 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CACNA1AO00555 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CACNA1AO00555 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CACNA1AO00555 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.36■□□□□ 0.53
CACNA1AO00555 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CACNA1AO00555 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.36■□□□□ 0.53
CACNA1AO00555 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CACNA1AO00555 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CACNA1AO00555 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CACNA1AO00555 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.36■□□□□ 0.53
CACNA1AO00555 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.35■□□□□ 0.53
CACNA1AO00555 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.35■□□□□ 0.53
CACNA1AO00555 AL136038.4-201ENST00000603606 1261 ntBASIC18.35■□□□□ 0.53
CACNA1AO00555 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.35■□□□□ 0.53
CACNA1AO00555 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CACNA1AO00555 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CACNA1AO00555 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CACNA1AO00555 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CACNA1AO00555 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CACNA1AO00555 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CACNA1AO00555 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.35■□□□□ 0.53
CACNA1AO00555 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CACNA1AO00555 RPS8P6-201ENST00000426177 609 ntBASIC18.35■□□□□ 0.53
CACNA1AO00555 SPCS2P1-201ENST00000561636 679 ntBASIC18.35■□□□□ 0.53
CACNA1AO00555 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.35■□□□□ 0.53
CACNA1AO00555 AC233702.3-201ENST00000578656 1387 ntBASIC18.35■□□□□ 0.53
CACNA1AO00555 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CACNA1AO00555 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.35■□□□□ 0.53
CACNA1AO00555 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CACNA1AO00555 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CACNA1AO00555 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CACNA1AO00555 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.35■□□□□ 0.53
CACNA1AO00555 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA1AO00555 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA1AO00555 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA1AO00555 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CACNA1AO00555 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA1AO00555 AC012645.4-201ENST00000610691 1061 ntBASIC18.34■□□□□ 0.53
CACNA1AO00555 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.34■□□□□ 0.53
CACNA1AO00555 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA1AO00555 FAM99A-202ENST00000538190 1989 ntBASIC18.34■□□□□ 0.53
CACNA1AO00555 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms