Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP3B1O00203 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP3B1O00203 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
AP3B1O00203 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.62■□□□□ 0.73
AP3B1O00203 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
AP3B1O00203 UNC93B4-201ENST00000505679 747 ntBASIC19.62■□□□□ 0.73
AP3B1O00203 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.62■□□□□ 0.73
AP3B1O00203 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
AP3B1O00203 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.62■□□□□ 0.73
AP3B1O00203 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
AP3B1O00203 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP3B1O00203 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
AP3B1O00203 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP3B1O00203 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
AP3B1O00203 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.61■□□□□ 0.73
AP3B1O00203 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP3B1O00203 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
AP3B1O00203 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP3B1O00203 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP3B1O00203 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP3B1O00203 AC141586.3-201ENST00000562166 1838 ntBASIC19.61■□□□□ 0.73
AP3B1O00203 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP3B1O00203 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
AP3B1O00203 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP3B1O00203 PRKY-204ENST00000533551 1019 ntBASIC19.61■□□□□ 0.73
AP3B1O00203 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
AP3B1O00203 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
AP3B1O00203 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP3B1O00203 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP3B1O00203 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
AP3B1O00203 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP3B1O00203 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
AP3B1O00203 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
AP3B1O00203 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3B1O00203 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3B1O00203 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3B1O00203 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3B1O00203 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3B1O00203 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3B1O00203 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3B1O00203 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3B1O00203 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3B1O00203 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.6■□□□□ 0.73
AP3B1O00203 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.6■□□□□ 0.73
AP3B1O00203 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
AP3B1O00203 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.6■□□□□ 0.73
AP3B1O00203 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.6■□□□□ 0.73
AP3B1O00203 AC090192.1-201ENST00000517740 490 ntBASIC19.6■□□□□ 0.73
AP3B1O00203 AC098934.4-201ENST00000564127 592 ntBASIC19.6■□□□□ 0.73
AP3B1O00203 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
AP3B1O00203 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3B1O00203 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
AP3B1O00203 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.6■□□□□ 0.73
AP3B1O00203 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3B1O00203 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3B1O00203 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP3B1O00203 AP000974.1-201ENST00000623909 2387 ntBASIC19.59■□□□□ 0.73
AP3B1O00203 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
AP3B1O00203 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
AP3B1O00203 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
AP3B1O00203 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
AP3B1O00203 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.59■□□□□ 0.73
AP3B1O00203 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
AP3B1O00203 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
AP3B1O00203 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.59■□□□□ 0.73
AP3B1O00203 POM121L13P-201ENST00000422362 380 ntBASIC19.59■□□□□ 0.73
AP3B1O00203 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.59■□□□□ 0.73
AP3B1O00203 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.59■□□□□ 0.73
AP3B1O00203 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.59■□□□□ 0.73
AP3B1O00203 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.59■□□□□ 0.73
AP3B1O00203 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.59■□□□□ 0.73
AP3B1O00203 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
AP3B1O00203 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.59■□□□□ 0.73
AP3B1O00203 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.59■□□□□ 0.73
AP3B1O00203 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.59■□□□□ 0.73
AP3B1O00203 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.59■□□□□ 0.73
AP3B1O00203 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP3B1O00203 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
AP3B1O00203 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
AP3B1O00203 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.58■□□□□ 0.73
AP3B1O00203 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.73
AP3B1O00203 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
AP3B1O00203 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
AP3B1O00203 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.58■□□□□ 0.73
AP3B1O00203 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
AP3B1O00203 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.58■□□□□ 0.73
AP3B1O00203 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
AP3B1O00203 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
AP3B1O00203 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
AP3B1O00203 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
AP3B1O00203 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP3B1O00203 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP3B1O00203 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.58■□□□□ 0.72
AP3B1O00203 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
AP3B1O00203 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP3B1O00203 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.58■□□□□ 0.72
AP3B1O00203 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
AP3B1O00203 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.58■□□□□ 0.72
AP3B1O00203 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.58■□□□□ 0.72
AP3B1O00203 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms