Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MEIS3P1A6NDR6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.65■□□□□ 0.26
MEIS3P1A6NDR6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.65■□□□□ 0.26
MEIS3P1A6NDR6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
MEIS3P1A6NDR6 AL031963.3-201ENST00000606441 850 ntBASIC16.65■□□□□ 0.26
MEIS3P1A6NDR6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.65■□□□□ 0.26
MEIS3P1A6NDR6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
MEIS3P1A6NDR6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.65■□□□□ 0.26
MEIS3P1A6NDR6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
MEIS3P1A6NDR6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MEIS3P1A6NDR6 AL390961.4-201ENST00000623958 2535 ntBASIC16.65■□□□□ 0.26
MEIS3P1A6NDR6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.65■□□□□ 0.26
MEIS3P1A6NDR6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MEIS3P1A6NDR6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MEIS3P1A6NDR6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MEIS3P1A6NDR6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.65■□□□□ 0.26
MEIS3P1A6NDR6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MEIS3P1A6NDR6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
MEIS3P1A6NDR6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
MEIS3P1A6NDR6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MEIS3P1A6NDR6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MEIS3P1A6NDR6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.65■□□□□ 0.26
MEIS3P1A6NDR6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
MEIS3P1A6NDR6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.64■□□□□ 0.26
MEIS3P1A6NDR6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 KRT8P20-201ENST00000423953 1409 ntBASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 SUDS3P1-201ENST00000505831 966 ntBASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
MEIS3P1A6NDR6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 AC004854.2-201ENST00000608450 1441 ntBASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 AC027612.3-201ENST00000413684 1047 ntBASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 SLC7A5P1-201ENST00000568957 537 ntBASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MEIS3P1A6NDR6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MEIS3P1A6NDR6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MEIS3P1A6NDR6 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MEIS3P1A6NDR6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MEIS3P1A6NDR6 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MEIS3P1A6NDR6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MEIS3P1A6NDR6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
MEIS3P1A6NDR6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.62■□□□□ 0.25
MEIS3P1A6NDR6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MEIS3P1A6NDR6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
MEIS3P1A6NDR6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
MEIS3P1A6NDR6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
MEIS3P1A6NDR6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
MEIS3P1A6NDR6 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms