Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 AC004911.1-201ENST00000416316 871 ntBASIC18.7■□□□□ 0.58
RNF103-CHMP3A0A140T963 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
RNF103-CHMP3A0A140T963 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF103-CHMP3A0A140T963 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF103-CHMP3A0A140T963 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF103-CHMP3A0A140T963 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.7■□□□□ 0.58
RNF103-CHMP3A0A140T963 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF103-CHMP3A0A140T963 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF103-CHMP3A0A140T963 AC005082.1-201ENST00000413042 2259 ntBASIC18.7■□□□□ 0.58
RNF103-CHMP3A0A140T963 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF103-CHMP3A0A140T963 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF103-CHMP3A0A140T963 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF103-CHMP3A0A140T963 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF103-CHMP3A0A140T963 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF103-CHMP3A0A140T963 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF103-CHMP3A0A140T963 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF103-CHMP3A0A140T963 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF103-CHMP3A0A140T963 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RNF103-CHMP3A0A140T963 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF103-CHMP3A0A140T963 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RNF103-CHMP3A0A140T963 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF103-CHMP3A0A140T963 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF103-CHMP3A0A140T963 HLA-G-202ENST00000376815 851 ntBASIC18.69■□□□□ 0.58
RNF103-CHMP3A0A140T963 HLA-G-203ENST00000376818 1127 ntBASIC18.69■□□□□ 0.58
RNF103-CHMP3A0A140T963 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF103-CHMP3A0A140T963 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF103-CHMP3A0A140T963 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF103-CHMP3A0A140T963 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF103-CHMP3A0A140T963 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF103-CHMP3A0A140T963 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF103-CHMP3A0A140T963 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RNF103-CHMP3A0A140T963 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
RNF103-CHMP3A0A140T963 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.69■□□□□ 0.58
RNF103-CHMP3A0A140T963 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.69■□□□□ 0.58
RNF103-CHMP3A0A140T963 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF103-CHMP3A0A140T963 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF103-CHMP3A0A140T963 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF103-CHMP3A0A140T963 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF103-CHMP3A0A140T963 AC007613.1-201ENST00000572811 2597 ntBASIC18.69■□□□□ 0.58
RNF103-CHMP3A0A140T963 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
RNF103-CHMP3A0A140T963 KRT17P1-201ENST00000399211 1546 ntBASIC18.69■□□□□ 0.58
RNF103-CHMP3A0A140T963 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF103-CHMP3A0A140T963 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF103-CHMP3A0A140T963 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF103-CHMP3A0A140T963 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF103-CHMP3A0A140T963 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF103-CHMP3A0A140T963 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF103-CHMP3A0A140T963 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF103-CHMP3A0A140T963 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF103-CHMP3A0A140T963 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF103-CHMP3A0A140T963 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF103-CHMP3A0A140T963 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF103-CHMP3A0A140T963 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.68■□□□□ 0.58
RNF103-CHMP3A0A140T963 C2orf69P4-201ENST00000565394 541 ntBASIC18.68■□□□□ 0.58
RNF103-CHMP3A0A140T963 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RNF103-CHMP3A0A140T963 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF103-CHMP3A0A140T963 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF103-CHMP3A0A140T963 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF103-CHMP3A0A140T963 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
RNF103-CHMP3A0A140T963 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 AL512625.2-201ENST00000417533 625 ntBASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 AC009237.14-201ENST00000609975 1594 ntBASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF103-CHMP3A0A140T963 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF103-CHMP3A0A140T963 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF103-CHMP3A0A140T963 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF103-CHMP3A0A140T963 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF103-CHMP3A0A140T963 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms