Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC090018.1-201ENST00000434369 367 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 PTGES3P1-201ENST00000439531 483 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 AC118469.1-201ENST00000442943 488 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 AL035551.1-201ENST00000446931 348 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 TRY2P-201ENST00000448860 689 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 AC104978.1-201ENST00000449387 391 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 MTCO3P16-201ENST00000454456 754 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 USP9YP25-201ENST00000457708 443 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 RPL31P3-201ENST00000458430 332 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 snoU13.20-201ENST00000459180 104 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 RPS3AP43-201ENST00000479743 781 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 RN7SL809P-201ENST00000482040 297 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 AC058823.1-201ENST00000485315 474 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 AC022133.1-201ENST00000490961 571 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 AC008837.1-201ENST00000511513 412 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 FTH1P11-201ENST00000517577 551 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 AC104417.1-201ENST00000523974 751 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 AL390334.1-201ENST00000556395 450 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 MIR4436B2-201ENST00000581415 91 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 MIR4436B1-201ENST00000583272 91 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 RN7SL622P-201ENST00000585292 275 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 AL136295.6-201ENST00000610486 658 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 AC015722.2-201ENST00000622210 551 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 AC098679.5-201ENST00000624394 571 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 AC135068.12-201ENST00000637370 931 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 MIR1322-201ENST00000638013 71 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 CASC19-260ENST00000641828 2001 ntBASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 UBE2Q2P1-202ENST00000354771 883 ntBASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 RNU4-24P-201ENST00000364565 139 ntBASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 OR8V1P-201ENST00000395193 873 ntBASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 RN7SKP17-201ENST00000411242 351 ntBASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 RAP1BP1-201ENST00000412709 553 ntBASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 AL035407.1-201ENST00000429211 571 ntBASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 RBMY2QP-201ENST00000429799 1147 ntBASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 RPS29P10-201ENST00000439197 166 ntBASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 MTND2P4-201ENST00000445034 1004 ntBASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 AC068135.1-201ENST00000446164 246 ntBASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 ELOCP30-201ENST00000447108 299 ntBASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 CCNB1IP1P3-201ENST00000454702 829 ntBASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 AC090114.3-201ENST00000479267 829 ntBASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 AC004980.4-201ENST00000513375 203 ntBASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 RNU6-1129P-201ENST00000515964 104 ntBASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 snoU109.6-201ENST00000516831 118 ntBASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 AC008015.1-201ENST00000555505 465 ntBASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 AC023813.2-201ENST00000564321 469 ntBASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 AL354943.1-201ENST00000572103 781 ntBASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 AC011447.4-201ENST00000587562 111 ntBASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 MTND3P19-201ENST00000603825 345 ntBASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 DPRXP5-201ENST00000604662 539 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms