Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.42□□□□□ -1.7
ATG4BQ9Y4P1 AC011005.3-201ENST00000491624 395 ntBASIC4.42□□□□□ -1.7
ATG4BQ9Y4P1 AC005912.1-201ENST00000495392 255 ntBASIC4.42□□□□□ -1.7
ATG4BQ9Y4P1 AC025164.1-201ENST00000496249 478 ntBASIC4.42□□□□□ -1.7
ATG4BQ9Y4P1 AC025459.1-201ENST00000504072 156 ntBASIC4.42□□□□□ -1.7
ATG4BQ9Y4P1 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.42□□□□□ -1.7
ATG4BQ9Y4P1 SETP12-201ENST00000514068 805 ntBASIC4.42□□□□□ -1.7
ATG4BQ9Y4P1 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.42□□□□□ -1.7
ATG4BQ9Y4P1 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.42□□□□□ -1.7
ATG4BQ9Y4P1 AC137768.1-201ENST00000549998 553 ntBASIC4.42□□□□□ -1.7
ATG4BQ9Y4P1 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.42□□□□□ -1.7
ATG4BQ9Y4P1 CBX3P2-202ENST00000583365 535 ntBASIC4.42□□□□□ -1.7
ATG4BQ9Y4P1 AC010928.1-201ENST00000592477 1447 ntBASIC4.42□□□□□ -1.7
ATG4BQ9Y4P1 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.42□□□□□ -1.7
ATG4BQ9Y4P1 AC073091.2-201ENST00000603205 907 ntBASIC4.42□□□□□ -1.7
ATG4BQ9Y4P1 uc_338.9-201ENST00000617424 182 ntBASIC4.42□□□□□ -1.7
ATG4BQ9Y4P1 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.42□□□□□ -1.7
ATG4BQ9Y4P1 AC073592.7-201ENST00000623659 507 ntBASIC4.42□□□□□ -1.7
ATG4BQ9Y4P1 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.42□□□□□ -1.7
ATG4BQ9Y4P1 MAPK10-349ENST00000641767 3661 ntBASIC4.42□□□□□ -1.7
ATG4BQ9Y4P1 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ATG4BQ9Y4P1 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
ATG4BQ9Y4P1 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
ATG4BQ9Y4P1 AP001273.1-201ENST00000624493 3152 ntBASIC4.42□□□□□ -1.7
ATG4BQ9Y4P1 ZNF90P1-201ENST00000480493 1951 ntBASIC4.42□□□□□ -1.7
ATG4BQ9Y4P1 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ATG4BQ9Y4P1 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 AL590240.1-201ENST00000334118 313 ntBASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 RN7SKP115-201ENST00000363177 317 ntBASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 RN7SKP267-201ENST00000410381 285 ntBASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 RNU6-603P-201ENST00000411403 107 ntBASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 AC105402.1-201ENST00000413336 545 ntBASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 TMX2P1-201ENST00000436507 708 ntBASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 RPS26P2-201ENST00000440331 348 ntBASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 AC112206.1-201ENST00000468416 477 ntBASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 AC108751.2-201ENST00000469993 231 ntBASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 AC079075.1-201ENST00000559543 878 ntBASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 AL109741.3-201ENST00000561748 592 ntBASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 AC015912.2-201ENST00000571053 181 ntBASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 RNF138P2-201ENST00000603490 592 ntBASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 AL391834.1-201ENST00000609609 560 ntBASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 AC110792.4-201ENST00000609843 298 ntBASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 MIR7973-1-201ENST00000614683 76 ntBASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 AL356094.1-201ENST00000624663 1212 ntBASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 AC139713.2-215ENST00000641428 5037 ntBASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 AC126323.6-202ENST00000568092 3511 ntBASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.41□□□□□ -1.7
ATG4BQ9Y4P1 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.7
ATG4BQ9Y4P1 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
ATG4BQ9Y4P1 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ATG4BQ9Y4P1 MAPK10-286ENST00000641208 8747 ntBASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 RNU6-244P-201ENST00000391028 104 ntBASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 AC019070.1-201ENST00000415008 1024 ntBASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 ATG4AP1-201ENST00000416893 538 ntBASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 AC019050.1-201ENST00000418508 492 ntBASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 AL513533.1-201ENST00000453728 415 ntBASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 AC005229.2-201ENST00000456995 399 ntBASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 RPL23AP12-201ENST00000467573 473 ntBASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 SYT14P1-201ENST00000481459 721 ntBASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 NIP7P2-201ENST00000485801 544 ntBASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 AC107398.1-201ENST00000486904 505 ntBASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 RPL36AP41-201ENST00000493820 306 ntBASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 OR8K2P-201ENST00000524645 927 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms