Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.49□□□□□ -1.21
VPS9D1Q9Y2B5 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.49□□□□□ -1.21
VPS9D1Q9Y2B5 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
VPS9D1Q9Y2B5 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
VPS9D1Q9Y2B5 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC7.49□□□□□ -1.21
VPS9D1Q9Y2B5 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC7.49□□□□□ -1.21
VPS9D1Q9Y2B5 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
VPS9D1Q9Y2B5 DDX18P4-201ENST00000511690 1966 ntBASIC7.49□□□□□ -1.21
VPS9D1Q9Y2B5 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
VPS9D1Q9Y2B5 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
VPS9D1Q9Y2B5 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC7.49□□□□□ -1.21
VPS9D1Q9Y2B5 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
VPS9D1Q9Y2B5 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
VPS9D1Q9Y2B5 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
VPS9D1Q9Y2B5 AL355974.1-201ENST00000618896 1708 ntBASIC7.49□□□□□ -1.21
VPS9D1Q9Y2B5 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
VPS9D1Q9Y2B5 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
VPS9D1Q9Y2B5 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC7.49□□□□□ -1.21
VPS9D1Q9Y2B5 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC7.49□□□□□ -1.21
VPS9D1Q9Y2B5 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
VPS9D1Q9Y2B5 AL359922.2-201ENST00000581788 3017 ntBASIC7.49□□□□□ -1.21
VPS9D1Q9Y2B5 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC7.49□□□□□ -1.21
VPS9D1Q9Y2B5 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
VPS9D1Q9Y2B5 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 PABPC1P7-201ENST00000413177 1513 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 Y_RNA.22-201ENST00000362492 102 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 RNU6-562P-201ENST00000362731 107 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 RNA5SP378-201ENST00000363646 120 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 RNY1-201ENST00000364228 113 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 RNU6-81P-201ENST00000365608 104 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 RNU6-1029P-201ENST00000384109 107 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 MSRB1P1-201ENST00000396851 354 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 RN7SKP146-201ENST00000410242 334 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 POLHP1-201ENST00000411806 470 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 AC068138.1-201ENST00000412635 217 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 CRIP1P3-201ENST00000416794 220 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 AC068533.1-201ENST00000418542 415 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 AC012075.1-201ENST00000436549 580 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 SS18L2P1-201ENST00000445923 213 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 RN7SL508P-201ENST00000464472 303 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 RN7SL180P-201ENST00000466769 294 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 PRMT5P1-201ENST00000514351 598 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 SNORA25.11-201ENST00000515935 105 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 SCARNA6.1-201ENST00000516989 238 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 RNU6-570P-201ENST00000517051 105 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 RNU1-54P-201ENST00000517181 120 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 SNX18P27-201ENST00000523611 779 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 AC135001.1-201ENST00000544546 283 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 SNRPCP20-201ENST00000588011 210 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 AC012669.1-201ENST00000603209 283 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 MIR6807-201ENST00000621968 92 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 AL442639.1-201ENST00000625030 1899 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 TPTE2P4-201ENST00000258589 1605 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 Z99129.4-201ENST00000624649 2435 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 AC008555.1-201ENST00000561778 2757 ntBASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
VPS9D1Q9Y2B5 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 AC009166.2-201ENST00000624410 2833 ntBASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 GTF2IP1-202ENST00000614592 2047 ntBASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms