Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC021205.1-201ENST00000468797 348 ntBASIC7.71□□□□□ -1.18
ZC3H4Q9UPT8 AC092865.4-201ENST00000477936 615 ntBASIC7.71□□□□□ -1.18
ZC3H4Q9UPT8 THAP6-203ENST00000502620 582 ntTSL 3 BASIC7.71□□□□□ -1.18
ZC3H4Q9UPT8 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.71□□□□□ -1.18
ZC3H4Q9UPT8 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.71□□□□□ -1.18
ZC3H4Q9UPT8 AC111000.3-201ENST00000508057 576 ntBASIC7.71□□□□□ -1.18
ZC3H4Q9UPT8 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC7.71□□□□□ -1.18
ZC3H4Q9UPT8 RNU6-885P-201ENST00000516607 104 ntBASIC7.71□□□□□ -1.18
ZC3H4Q9UPT8 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC7.71□□□□□ -1.18
ZC3H4Q9UPT8 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC7.71□□□□□ -1.18
ZC3H4Q9UPT8 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC7.71□□□□□ -1.18
ZC3H4Q9UPT8 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC7.71□□□□□ -1.18
ZC3H4Q9UPT8 AC044860.2-201ENST00000561005 179 ntBASIC7.71□□□□□ -1.18
ZC3H4Q9UPT8 AL157394.1-201ENST00000562983 1224 ntBASIC7.71□□□□□ -1.18
ZC3H4Q9UPT8 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC7.71□□□□□ -1.18
ZC3H4Q9UPT8 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC7.71□□□□□ -1.18
ZC3H4Q9UPT8 AC087283.1-201ENST00000604029 1074 ntBASIC7.71□□□□□ -1.18
ZC3H4Q9UPT8 SUGT1P3-202ENST00000604259 383 ntBASIC7.71□□□□□ -1.18
ZC3H4Q9UPT8 CYCSP1-201ENST00000604815 315 ntBASIC7.71□□□□□ -1.18
ZC3H4Q9UPT8 COX6CP4-201ENST00000605798 228 ntBASIC7.71□□□□□ -1.18
ZC3H4Q9UPT8 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.71□□□□□ -1.18
ZC3H4Q9UPT8 AC008115.3-201ENST00000614874 549 ntBASIC7.71□□□□□ -1.18
ZC3H4Q9UPT8 AC037198.3-201ENST00000616754 526 ntBASIC7.71□□□□□ -1.18
ZC3H4Q9UPT8 AC119674.1-212ENST00000641155 993 ntBASIC7.71□□□□□ -1.18
ZC3H4Q9UPT8 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
ZC3H4Q9UPT8 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.71□□□□□ -1.18
ZC3H4Q9UPT8 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
ZC3H4Q9UPT8 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.71□□□□□ -1.18
ZC3H4Q9UPT8 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 GDI2P1-201ENST00000429312 1336 ntBASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 OSBPL9P1-201ENST00000604744 1469 ntBASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 CUBNP3-201ENST00000457461 1784 ntBASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 AC127070.3-201ENST00000503695 3263 ntBASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 RNU1-134P-201ENST00000362935 165 ntBASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 RNU6-666P-201ENST00000363499 107 ntBASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 RNU6-533P-201ENST00000384144 107 ntBASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 RNU6-729P-201ENST00000384399 107 ntBASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 USP9YP36-201ENST00000424581 829 ntBASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 MTCO2P12-201ENST00000427426 682 ntBASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 YWHAQP9-201ENST00000445891 512 ntBASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 RGS5-217ENST00000451759 835 ntTSL 3 BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 RPL7P42-201ENST00000481005 679 ntBASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 AC068522.1-201ENST00000482895 345 ntBASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 RN7SL714P-201ENST00000487050 298 ntBASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 EIF3LP3-201ENST00000495197 822 ntBASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 NDUFB5P1-201ENST00000508134 564 ntBASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 RNU6-1281P-201ENST00000516223 105 ntBASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 RNU6-1045P-201ENST00000516321 107 ntBASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 AC018558.5-201ENST00000565840 952 ntBASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 AC141257.3-201ENST00000572906 215 ntBASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 XIST-210ENST00000602863 775 ntTSL 3 BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 AL365204.3-201ENST00000612448 685 ntBASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 SPATA31C1-201ENST00000420021 3895 ntBASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
ZC3H4Q9UPT8 CASC19-260ENST00000641828 2001 ntBASIC7.69□□□□□ -1.18
ZC3H4Q9UPT8 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
ZC3H4Q9UPT8 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
ZC3H4Q9UPT8 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC7.69□□□□□ -1.18
ZC3H4Q9UPT8 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
ZC3H4Q9UPT8 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC7.69□□□□□ -1.18
ZC3H4Q9UPT8 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
ZC3H4Q9UPT8 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
ZC3H4Q9UPT8 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
ZC3H4Q9UPT8 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
ZC3H4Q9UPT8 PROS2P-201ENST00000474651 1951 ntBASIC7.69□□□□□ -1.18
ZC3H4Q9UPT8 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
ZC3H4Q9UPT8 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
ZC3H4Q9UPT8 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
ZC3H4Q9UPT8 UG0898H09-202ENST00000623646 7040 ntBASIC7.69□□□□□ -1.18
ZC3H4Q9UPT8 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
ZC3H4Q9UPT8 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms