Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 RNU6-534P-201ENST00000364877 106 ntBASIC6.71□□□□□ -1.34
CNTN3Q9P232 SNORD116-23-201ENST00000384645 92 ntBASIC6.71□□□□□ -1.34
CNTN3Q9P232 MIR320B1-201ENST00000390209 79 ntBASIC6.71□□□□□ -1.34
CNTN3Q9P232 AL589647.1-201ENST00000402485 466 ntBASIC6.71□□□□□ -1.34
CNTN3Q9P232 RPS3AP3-201ENST00000411933 242 ntBASIC6.71□□□□□ -1.34
CNTN3Q9P232 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CNTN3Q9P232 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CNTN3Q9P232 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CNTN3Q9P232 NIPA2P1-201ENST00000426223 976 ntBASIC6.71□□□□□ -1.34
CNTN3Q9P232 AC073335.1-201ENST00000427776 363 ntBASIC6.71□□□□□ -1.34
CNTN3Q9P232 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CNTN3Q9P232 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.71□□□□□ -1.34
CNTN3Q9P232 AC110602.1-201ENST00000437414 318 ntBASIC6.71□□□□□ -1.34
CNTN3Q9P232 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC6.71□□□□□ -1.34
CNTN3Q9P232 AC092809.1-201ENST00000441469 474 ntBASIC6.71□□□□□ -1.34
CNTN3Q9P232 AL512605.1-202ENST00000441919 381 ntBASIC6.71□□□□□ -1.34
CNTN3Q9P232 GAPDHP23-201ENST00000444823 993 ntBASIC6.71□□□□□ -1.34
CNTN3Q9P232 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC6.71□□□□□ -1.34
CNTN3Q9P232 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC6.71□□□□□ -1.34
CNTN3Q9P232 RPS20P24-201ENST00000457473 361 ntBASIC6.71□□□□□ -1.34
CNTN3Q9P232 AC068228.1-201ENST00000461723 211 ntBASIC6.71□□□□□ -1.34
CNTN3Q9P232 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.71□□□□□ -1.34
CNTN3Q9P232 LSM3P4-201ENST00000502948 309 ntBASIC6.71□□□□□ -1.34
CNTN3Q9P232 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.71□□□□□ -1.34
CNTN3Q9P232 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC6.71□□□□□ -1.34
CNTN3Q9P232 LRRC34P2-201ENST00000514850 553 ntBASIC6.71□□□□□ -1.34
CNTN3Q9P232 IGKV2D-10-201ENST00000520194 281 ntBASIC6.71□□□□□ -1.34
CNTN3Q9P232 OR5AP1P-201ENST00000529730 940 ntBASIC6.71□□□□□ -1.34
CNTN3Q9P232 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC6.71□□□□□ -1.34
CNTN3Q9P232 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.71□□□□□ -1.34
CNTN3Q9P232 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC6.71□□□□□ -1.34
CNTN3Q9P232 CYCSP38-201ENST00000559840 322 ntBASIC6.71□□□□□ -1.34
CNTN3Q9P232 MIR5697-201ENST00000578045 78 ntBASIC6.71□□□□□ -1.34
CNTN3Q9P232 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.71□□□□□ -1.34
CNTN3Q9P232 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.71□□□□□ -1.34
CNTN3Q9P232 AC079315.1-201ENST00000602952 623 ntBASIC6.71□□□□□ -1.34
CNTN3Q9P232 AC091488.1-201ENST00000604239 660 ntBASIC6.71□□□□□ -1.34
CNTN3Q9P232 AL139286.1-201ENST00000604465 483 ntBASIC6.71□□□□□ -1.34
CNTN3Q9P232 MIR6778-201ENST00000617912 73 ntBASIC6.71□□□□□ -1.34
CNTN3Q9P232 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC6.71□□□□□ -1.34
CNTN3Q9P232 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC6.71□□□□□ -1.34
CNTN3Q9P232 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC6.71□□□□□ -1.34
CNTN3Q9P232 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
CNTN3Q9P232 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CNTN3Q9P232 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.71□□□□□ -1.34
CNTN3Q9P232 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
CNTN3Q9P232 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.71□□□□□ -1.34
CNTN3Q9P232 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.71□□□□□ -1.34
CNTN3Q9P232 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CNTN3Q9P232 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CNTN3Q9P232 AC093311.1-201ENST00000506586 2021 ntBASIC6.71□□□□□ -1.34
CNTN3Q9P232 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CNTN3Q9P232 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CNTN3Q9P232 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.7□□□□□ -1.34
CNTN3Q9P232 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CNTN3Q9P232 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CNTN3Q9P232 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC6.7□□□□□ -1.34
CNTN3Q9P232 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CNTN3Q9P232 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CNTN3Q9P232 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
CNTN3Q9P232 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CNTN3Q9P232 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CNTN3Q9P232 AC093225.1-201ENST00000506867 1408 ntBASIC6.7□□□□□ -1.34
CNTN3Q9P232 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CNTN3Q9P232 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.7□□□□□ -1.34
CNTN3Q9P232 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CNTN3Q9P232 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.7□□□□□ -1.34
CNTN3Q9P232 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.7□□□□□ -1.34
CNTN3Q9P232 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
CNTN3Q9P232 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.7□□□□□ -1.34
CNTN3Q9P232 Y_RNA.97-201ENST00000363094 102 ntBASIC6.7□□□□□ -1.34
CNTN3Q9P232 Y_RNA.160-201ENST00000363677 92 ntBASIC6.7□□□□□ -1.34
CNTN3Q9P232 SNORA51.12-201ENST00000384448 134 ntBASIC6.7□□□□□ -1.34
CNTN3Q9P232 Y_RNA.509-201ENST00000384506 99 ntBASIC6.7□□□□□ -1.34
CNTN3Q9P232 MIR433-201ENST00000384837 93 ntBASIC6.7□□□□□ -1.34
CNTN3Q9P232 AL356057.2-201ENST00000403318 432 ntBASIC6.7□□□□□ -1.34
CNTN3Q9P232 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC6.7□□□□□ -1.34
CNTN3Q9P232 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC6.7□□□□□ -1.34
CNTN3Q9P232 BOLA3P4-201ENST00000418151 400 ntBASIC6.7□□□□□ -1.34
CNTN3Q9P232 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.7□□□□□ -1.34
CNTN3Q9P232 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.7□□□□□ -1.34
CNTN3Q9P232 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
CNTN3Q9P232 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.7□□□□□ -1.34
CNTN3Q9P232 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC6.7□□□□□ -1.34
CNTN3Q9P232 AC093019.1-201ENST00000443135 252 ntBASIC6.7□□□□□ -1.34
CNTN3Q9P232 HMGN1P2-201ENST00000445197 310 ntBASIC6.7□□□□□ -1.34
CNTN3Q9P232 RPS27AP15-201ENST00000447672 466 ntBASIC6.7□□□□□ -1.34
CNTN3Q9P232 RPL7P59-201ENST00000447700 943 ntBASIC6.7□□□□□ -1.34
CNTN3Q9P232 PPIAP27-201ENST00000453800 265 ntBASIC6.7□□□□□ -1.34
CNTN3Q9P232 NF1P3-201ENST00000457709 450 ntBASIC6.7□□□□□ -1.34
CNTN3Q9P232 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.7□□□□□ -1.34
CNTN3Q9P232 RNF138P1-201ENST00000502765 546 ntBASIC6.7□□□□□ -1.34
CNTN3Q9P232 NENFP3-201ENST00000503735 313 ntBASIC6.7□□□□□ -1.34
CNTN3Q9P232 NDUFA5P12-201ENST00000503796 343 ntBASIC6.7□□□□□ -1.34
CNTN3Q9P232 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.7□□□□□ -1.34
CNTN3Q9P232 AC022447.3-201ENST00000506865 495 ntBASIC6.7□□□□□ -1.34
CNTN3Q9P232 AC108064.1-201ENST00000513791 460 ntBASIC6.7□□□□□ -1.34
CNTN3Q9P232 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC6.7□□□□□ -1.34
CNTN3Q9P232 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC6.7□□□□□ -1.34
CNTN3Q9P232 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms