Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PHRF1Q9P1Y6 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
PHRF1Q9P1Y6 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PHRF1Q9P1Y6 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PHRF1Q9P1Y6 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.58□□□□□ -1.52
PHRF1Q9P1Y6 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PHRF1Q9P1Y6 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PHRF1Q9P1Y6 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.58□□□□□ -1.52
PHRF1Q9P1Y6 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PHRF1Q9P1Y6 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PHRF1Q9P1Y6 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PHRF1Q9P1Y6 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
PHRF1Q9P1Y6 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
PHRF1Q9P1Y6 RNU6-213P-201ENST00000384051 104 ntBASIC5.58□□□□□ -1.52
PHRF1Q9P1Y6 TCEA1P4-201ENST00000415066 844 ntBASIC5.58□□□□□ -1.52
PHRF1Q9P1Y6 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.58□□□□□ -1.52
PHRF1Q9P1Y6 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.58□□□□□ -1.52
PHRF1Q9P1Y6 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PHRF1Q9P1Y6 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.58□□□□□ -1.52
PHRF1Q9P1Y6 AC110743.1-201ENST00000584870 478 ntBASIC5.58□□□□□ -1.52
PHRF1Q9P1Y6 AC096577.2-201ENST00000611455 153 ntBASIC5.58□□□□□ -1.52
PHRF1Q9P1Y6 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PHRF1Q9P1Y6 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PHRF1Q9P1Y6 SPATA31D2P-201ENST00000429999 4388 ntBASIC5.57□□□□□ -1.52
PHRF1Q9P1Y6 FAM91A3P-201ENST00000456826 2544 ntBASIC5.57□□□□□ -1.52
PHRF1Q9P1Y6 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PHRF1Q9P1Y6 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PHRF1Q9P1Y6 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PHRF1Q9P1Y6 RNA5SP22-201ENST00000365393 109 ntBASIC5.57□□□□□ -1.52
PHRF1Q9P1Y6 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
PHRF1Q9P1Y6 RAB9AP3-201ENST00000412737 573 ntBASIC5.57□□□□□ -1.52
PHRF1Q9P1Y6 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.57□□□□□ -1.52
PHRF1Q9P1Y6 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.57□□□□□ -1.52
PHRF1Q9P1Y6 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.57□□□□□ -1.52
PHRF1Q9P1Y6 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.57□□□□□ -1.52
PHRF1Q9P1Y6 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PHRF1Q9P1Y6 RAB9AP1-201ENST00000449393 573 ntBASIC5.57□□□□□ -1.52
PHRF1Q9P1Y6 SNORA59A-201ENST00000459326 152 ntBASIC5.57□□□□□ -1.52
PHRF1Q9P1Y6 AC138938.1-201ENST00000515431 782 ntBASIC5.57□□□□□ -1.52
PHRF1Q9P1Y6 LSM3P2-201ENST00000551246 273 ntBASIC5.57□□□□□ -1.52
PHRF1Q9P1Y6 CASC19-284ENST00000642142 1868 ntBASIC5.57□□□□□ -1.52
PHRF1Q9P1Y6 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
PHRF1Q9P1Y6 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.57□□□□□ -1.52
PHRF1Q9P1Y6 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PHRF1Q9P1Y6 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
PHRF1Q9P1Y6 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PHRF1Q9P1Y6 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 AC007688.1-201ENST00000475592 759 ntBASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 ACTR3P3-201ENST00000480448 893 ntBASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 RPS4XP15-201ENST00000489210 795 ntBASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 MORF4L2P1-201ENST00000503761 858 ntBASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 AC010487.1-201ENST00000594408 1172 ntBASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 FP236240.3-201ENST00000623061 327 ntBASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 ZNF285B-201ENST00000561698 1767 ntBASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 AL049781.1-201ENST00000623195 3585 ntBASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 AL356274.2-201ENST00000624379 3752 ntBASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 AC006499.5-201ENST00000505037 514 ntBASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 KRT19P6-201ENST00000510983 209 ntBASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 RN7SKP141-201ENST00000516167 338 ntBASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 CYCSP28-201ENST00000534284 321 ntBASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.56□□□□□ -1.52
PHRF1Q9P1Y6 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PHRF1Q9P1Y6 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PHRF1Q9P1Y6 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.55□□□□□ -1.52
PHRF1Q9P1Y6 HSPD1P14-201ENST00000432666 1618 ntBASIC5.55□□□□□ -1.52
PHRF1Q9P1Y6 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
PHRF1Q9P1Y6 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms