Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 AC104837.2-201ENST00000427236 424 ntBASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 NMNAT1P2-201ENST00000435192 860 ntBASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 RPL12P3-201ENST00000440080 396 ntBASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 RPL36AP15-201ENST00000444514 266 ntBASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 AC079168.2-201ENST00000453977 416 ntBASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 CYCSP20-201ENST00000473154 315 ntBASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 RPL5P22-201ENST00000480199 884 ntBASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 FTH1P11-201ENST00000517577 551 ntBASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 MTND1P36-201ENST00000522384 936 ntBASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 AP001922.4-201ENST00000526967 290 ntBASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 AC092451.2-201ENST00000538746 658 ntBASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 AP003717.3-201ENST00000544832 1180 ntBASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 AC106785.3-201ENST00000564064 847 ntBASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 AC090751.1-201ENST00000566966 267 ntBASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 MIR4436B2-201ENST00000581415 91 ntBASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 AC090312.2-201ENST00000582687 378 ntBASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 MIR4436B1-201ENST00000583272 91 ntBASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 MIR4737-201ENST00000583979 81 ntBASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 AC005776.1-201ENST00000603164 290 ntBASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 TCP11X1-202ENST00000622971 1372 ntBASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 RPL23AP59-201ENST00000399415 461 ntBASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 RN7SKP125-201ENST00000410481 302 ntBASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 OR5AW1P-201ENST00000426334 1006 ntBASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 NRBF2P3-201ENST00000432731 865 ntBASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 AP000949.1-201ENST00000438328 629 ntBASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 MRPL48P1-201ENST00000445390 636 ntBASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 RPL32P14-201ENST00000463196 378 ntBASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 AC073358.1-201ENST00000505671 684 ntBASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 OR7H2P-201ENST00000513483 306 ntBASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 RNU1-6P-201ENST00000516290 144 ntBASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 AC008562.1-201ENST00000521763 330 ntBASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 AC009852.2-201ENST00000567898 485 ntBASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 MIR4512-201ENST00000583257 77 ntBASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 AL391358.1-201ENST00000605342 190 ntBASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 AC073569.3-201ENST00000619055 682 ntBASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 AC015871.5-202ENST00000623252 701 ntBASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 AC138907.10-201ENST00000623708 983 ntBASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 U6.107-201ENST00000637108 79 ntBASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 CASC19-222ENST00000641321 1173 ntBASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
BLOC1S4Q9NUP1 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
BLOC1S4Q9NUP1 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
BLOC1S4Q9NUP1 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
BLOC1S4Q9NUP1 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.28□□□□□ -1.56
BLOC1S4Q9NUP1 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
BLOC1S4Q9NUP1 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.28□□□□□ -1.56
BLOC1S4Q9NUP1 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
BLOC1S4Q9NUP1 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
BLOC1S4Q9NUP1 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
BLOC1S4Q9NUP1 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.28□□□□□ -1.56
BLOC1S4Q9NUP1 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
BLOC1S4Q9NUP1 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
BLOC1S4Q9NUP1 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
BLOC1S4Q9NUP1 HMGB3P18-201ENST00000406327 590 ntBASIC5.28□□□□□ -1.56
BLOC1S4Q9NUP1 MIR1303-201ENST00000408625 86 ntBASIC5.28□□□□□ -1.56
BLOC1S4Q9NUP1 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.28□□□□□ -1.56
BLOC1S4Q9NUP1 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
BLOC1S4Q9NUP1 AC108463.1-201ENST00000450258 347 ntBASIC5.28□□□□□ -1.56
BLOC1S4Q9NUP1 AC016550.1-201ENST00000505348 785 ntBASIC5.28□□□□□ -1.56
BLOC1S4Q9NUP1 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.28□□□□□ -1.56
BLOC1S4Q9NUP1 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.28□□□□□ -1.56
BLOC1S4Q9NUP1 AC010306.1-201ENST00000523223 1117 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms