Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 AC025125.1-201ENST00000624743 1922 ntBASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 BX510359.3-201ENST00000422168 306 ntBASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 AC244035.1-201ENST00000430042 390 ntBASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 AC108463.1-201ENST00000450258 347 ntBASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 AL672138.1-201ENST00000450604 1015 ntBASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 NDUFA5P7-201ENST00000452914 242 ntBASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 AC004129.2-201ENST00000457229 287 ntBASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 NF1P3-201ENST00000457709 450 ntBASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 SNORD125-201ENST00000459538 96 ntBASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 CCDC75P1-201ENST00000469247 791 ntBASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 RN7SL717P-201ENST00000478343 297 ntBASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 RN7SL273P-201ENST00000481561 299 ntBASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 UBA52P3-201ENST00000491303 382 ntBASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 AC083795.1-201ENST00000491760 320 ntBASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 AC025674.1-201ENST00000507074 324 ntBASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 RNA5SP340-201ENST00000517132 107 ntBASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 MTCYBP28-201ENST00000566728 1132 ntBASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 AC017100.2-201ENST00000584628 355 ntBASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 PSMA6P4-201ENST00000603247 718 ntBASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 AP001823.1-201ENST00000604056 1003 ntBASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 AC073114.1-201ENST00000612027 490 ntBASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 AC008443.7-201ENST00000622195 246 ntBASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 AC083899.1-201ENST00000454465 3819 ntBASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 MAPK10-328ENST00000641553 4009 ntBASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.49□□□□□ -1.53
CCM2LQ9NUG4 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 PARP4P2-201ENST00000446672 3326 ntBASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 CR381670.1-201ENST00000624291 1693 ntBASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 MTND4P34-201ENST00000572715 1371 ntBASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 AC092376.2-201ENST00000622621 4116 ntBASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 Y_RNA.18-201ENST00000362461 102 ntBASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 NPM1P40-201ENST00000412758 733 ntBASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 AL133482.1-201ENST00000415988 498 ntBASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 AC007394.1-201ENST00000421941 531 ntBASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 AC233981.1-201ENST00000423224 461 ntBASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 HMGN2P27-201ENST00000427352 270 ntBASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 AC008072.1-201ENST00000434254 824 ntBASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 AC092013.1-201ENST00000438795 332 ntBASIC5.48□□□□□ -1.53
CCM2LQ9NUG4 ATP5C1P1-201ENST00000441945 895 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms