Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC084036.1-201ENST00000609190 508 ntBASIC4.83□□□□□ -1.64
HPS4Q9NQG7 AL356274.1-201ENST00000617064 410 ntBASIC4.83□□□□□ -1.64
HPS4Q9NQG7 AC092159.4-201ENST00000624944 550 ntBASIC4.83□□□□□ -1.64
HPS4Q9NQG7 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.83□□□□□ -1.64
HPS4Q9NQG7 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
HPS4Q9NQG7 RAD17P1-201ENST00000418130 2042 ntBASIC4.83□□□□□ -1.64
HPS4Q9NQG7 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HPS4Q9NQG7 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.83□□□□□ -1.64
HPS4Q9NQG7 ZFRP1-201ENST00000457579 2970 ntBASIC4.83□□□□□ -1.64
HPS4Q9NQG7 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HPS4Q9NQG7 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
HPS4Q9NQG7 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.82□□□□□ -1.64
HPS4Q9NQG7 AL592182.3-201ENST00000642132 3304 ntBASIC4.82□□□□□ -1.64
HPS4Q9NQG7 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
HPS4Q9NQG7 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.82□□□□□ -1.64
HPS4Q9NQG7 OR14L1P-202ENST00000641545 3009 ntBASIC4.82□□□□□ -1.64
HPS4Q9NQG7 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HPS4Q9NQG7 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.82□□□□□ -1.64
HPS4Q9NQG7 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HPS4Q9NQG7 RNU6-984P-201ENST00000363236 109 ntBASIC4.82□□□□□ -1.64
HPS4Q9NQG7 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
HPS4Q9NQG7 MT-TP-201ENST00000387461 68 ntBASIC4.82□□□□□ -1.64
HPS4Q9NQG7 AL590762.2-201ENST00000395798 571 ntBASIC4.82□□□□□ -1.64
HPS4Q9NQG7 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.82□□□□□ -1.64
HPS4Q9NQG7 GAPDHP49-201ENST00000421421 961 ntBASIC4.82□□□□□ -1.64
HPS4Q9NQG7 AC093716.1-201ENST00000435923 377 ntBASIC4.82□□□□□ -1.64
HPS4Q9NQG7 RPL12P46-201ENST00000436610 195 ntBASIC4.82□□□□□ -1.64
HPS4Q9NQG7 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.82□□□□□ -1.64
HPS4Q9NQG7 YWHAZP2-201ENST00000440317 728 ntBASIC4.82□□□□□ -1.64
HPS4Q9NQG7 AL357520.1-201ENST00000441557 453 ntBASIC4.82□□□□□ -1.64
HPS4Q9NQG7 H2AFZP5-201ENST00000446960 382 ntBASIC4.82□□□□□ -1.64
HPS4Q9NQG7 CLIC4P1-201ENST00000453177 535 ntBASIC4.82□□□□□ -1.64
HPS4Q9NQG7 AL356981.1-201ENST00000454879 684 ntBASIC4.82□□□□□ -1.64
HPS4Q9NQG7 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.82□□□□□ -1.64
HPS4Q9NQG7 APOOP2-201ENST00000461561 539 ntBASIC4.82□□□□□ -1.64
HPS4Q9NQG7 AC011276.1-201ENST00000469688 323 ntBASIC4.82□□□□□ -1.64
HPS4Q9NQG7 AC090686.1-201ENST00000481577 749 ntBASIC4.82□□□□□ -1.64
HPS4Q9NQG7 RNA5SP249-201ENST00000516127 99 ntBASIC4.82□□□□□ -1.64
HPS4Q9NQG7 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.82□□□□□ -1.64
HPS4Q9NQG7 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
HPS4Q9NQG7 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.82□□□□□ -1.64
HPS4Q9NQG7 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.82□□□□□ -1.64
HPS4Q9NQG7 AC074029.2-201ENST00000551045 634 ntBASIC4.82□□□□□ -1.64
HPS4Q9NQG7 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HPS4Q9NQG7 KPNA2P3-201ENST00000584190 848 ntBASIC4.82□□□□□ -1.64
HPS4Q9NQG7 AL133338.2-201ENST00000604292 736 ntBASIC4.82□□□□□ -1.64
HPS4Q9NQG7 AC115286.1-201ENST00000604298 434 ntBASIC4.82□□□□□ -1.64
HPS4Q9NQG7 LINC00901.1-201ENST00000617252 152 ntBASIC4.82□□□□□ -1.64
HPS4Q9NQG7 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.82□□□□□ -1.64
HPS4Q9NQG7 AC019080.5-201ENST00000624891 757 ntBASIC4.82□□□□□ -1.64
HPS4Q9NQG7 U3.53-201ENST00000628922 216 ntBASIC4.82□□□□□ -1.64
HPS4Q9NQG7 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
HPS4Q9NQG7 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.82□□□□□ -1.64
HPS4Q9NQG7 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HPS4Q9NQG7 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.82□□□□□ -1.64
HPS4Q9NQG7 ZNF137P-201ENST00000456718 1920 ntBASIC4.82□□□□□ -1.64
HPS4Q9NQG7 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.81□□□□□ -1.64
HPS4Q9NQG7 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.81□□□□□ -1.64
HPS4Q9NQG7 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HPS4Q9NQG7 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
HPS4Q9NQG7 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HPS4Q9NQG7 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HPS4Q9NQG7 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HPS4Q9NQG7 MIR421-201ENST00000365696 85 ntBASIC4.81□□□□□ -1.64
HPS4Q9NQG7 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HPS4Q9NQG7 RNF19BPX-201ENST00000426224 625 ntBASIC4.81□□□□□ -1.64
HPS4Q9NQG7 RPS20P1-201ENST00000434853 354 ntBASIC4.81□□□□□ -1.64
HPS4Q9NQG7 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HPS4Q9NQG7 NUTF2P7-201ENST00000453086 375 ntBASIC4.81□□□□□ -1.64
HPS4Q9NQG7 MTND3P4-201ENST00000453537 303 ntBASIC4.81□□□□□ -1.64
HPS4Q9NQG7 PPIAP21-201ENST00000464473 501 ntBASIC4.81□□□□□ -1.64
HPS4Q9NQG7 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.81□□□□□ -1.64
HPS4Q9NQG7 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.81□□□□□ -1.64
HPS4Q9NQG7 AC093840.1-201ENST00000511599 336 ntBASIC4.81□□□□□ -1.64
HPS4Q9NQG7 AC007016.1-201ENST00000512110 244 ntBASIC4.81□□□□□ -1.64
HPS4Q9NQG7 RNA5SP464-201ENST00000516251 108 ntBASIC4.81□□□□□ -1.64
HPS4Q9NQG7 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.81□□□□□ -1.64
HPS4Q9NQG7 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.81□□□□□ -1.64
HPS4Q9NQG7 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.81□□□□□ -1.64
HPS4Q9NQG7 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.81□□□□□ -1.64
HPS4Q9NQG7 AC087888.1-201ENST00000550884 1254 ntBASIC4.81□□□□□ -1.64
HPS4Q9NQG7 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.81□□□□□ -1.64
HPS4Q9NQG7 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HPS4Q9NQG7 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.81□□□□□ -1.64
HPS4Q9NQG7 RNF138P2-201ENST00000603490 592 ntBASIC4.81□□□□□ -1.64
HPS4Q9NQG7 AC073137.1-201ENST00000605636 634 ntBASIC4.81□□□□□ -1.64
HPS4Q9NQG7 OR7A19P-201ENST00000608051 733 ntBASIC4.81□□□□□ -1.64
HPS4Q9NQG7 AC097505.1-201ENST00000610199 565 ntBASIC4.81□□□□□ -1.64
HPS4Q9NQG7 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.81□□□□□ -1.64
HPS4Q9NQG7 AC009032.1-201ENST00000617574 431 ntBASIC4.81□□□□□ -1.64
HPS4Q9NQG7 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.81□□□□□ -1.64
HPS4Q9NQG7 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HPS4Q9NQG7 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HPS4Q9NQG7 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HPS4Q9NQG7 OR51H2P-202ENST00000641424 3046 ntBASIC4.8□□□□□ -1.64
HPS4Q9NQG7 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HPS4Q9NQG7 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HPS4Q9NQG7 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
HPS4Q9NQG7 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HPS4Q9NQG7 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms