Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 OR5M12P-201ENST00000423388 929 ntBASIC5.27□□□□□ -1.57
USP29Q9HBJ7 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 FO393419.3-201ENST00000428741 282 ntBASIC5.27□□□□□ -1.57
USP29Q9HBJ7 RPS6P15-201ENST00000431996 751 ntBASIC5.27□□□□□ -1.57
USP29Q9HBJ7 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 MRPL35P2-201ENST00000448009 511 ntBASIC5.27□□□□□ -1.57
USP29Q9HBJ7 RPS6P2-201ENST00000454208 705 ntBASIC5.27□□□□□ -1.57
USP29Q9HBJ7 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 AP001922.4-201ENST00000526967 290 ntBASIC5.27□□□□□ -1.57
USP29Q9HBJ7 OR5AK3P-201ENST00000527486 1297 ntBASIC5.27□□□□□ -1.57
USP29Q9HBJ7 AC024940.3-201ENST00000538551 316 ntBASIC5.27□□□□□ -1.57
USP29Q9HBJ7 PCNPP1-201ENST00000552501 511 ntBASIC5.27□□□□□ -1.57
USP29Q9HBJ7 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 VN1R78P-201ENST00000597393 564 ntBASIC5.27□□□□□ -1.57
USP29Q9HBJ7 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 AC096586.1-201ENST00000610267 561 ntBASIC5.27□□□□□ -1.57
USP29Q9HBJ7 Mico1.1-201ENST00000611698 204 ntBASIC5.27□□□□□ -1.57
USP29Q9HBJ7 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 LINC01808-202ENST00000641680 1116 ntBASIC5.27□□□□□ -1.57
USP29Q9HBJ7 LINC01739-205ENST00000641890 573 ntBASIC5.27□□□□□ -1.57
USP29Q9HBJ7 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 CASC19-221ENST00000641309 1382 ntBASIC5.27□□□□□ -1.57
USP29Q9HBJ7 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 AC100778.3-201ENST00000580060 1750 ntBASIC5.27□□□□□ -1.57
USP29Q9HBJ7 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.26□□□□□ -1.57
USP29Q9HBJ7 AL031595.2-201ENST00000624215 19071 ntBASIC5.26□□□□□ -1.57
USP29Q9HBJ7 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 AC104623.2-202ENST00000623477 4002 ntBASIC5.26□□□□□ -1.57
USP29Q9HBJ7 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 AL133268.1-201ENST00000405676 1401 ntBASIC5.26□□□□□ -1.57
USP29Q9HBJ7 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 ANKRD36P1-201ENST00000344424 659 ntBASIC5.26□□□□□ -1.57
USP29Q9HBJ7 RNA5SP27-201ENST00000363839 119 ntBASIC5.26□□□□□ -1.57
USP29Q9HBJ7 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 RNU1-106P-201ENST00000384382 164 ntBASIC5.26□□□□□ -1.57
USP29Q9HBJ7 SNORD116-12-201ENST00000384468 92 ntBASIC5.26□□□□□ -1.57
USP29Q9HBJ7 MTCO1P56-201ENST00000401674 224 ntBASIC5.26□□□□□ -1.57
USP29Q9HBJ7 AC104333.2-201ENST00000422630 192 ntBASIC5.26□□□□□ -1.57
USP29Q9HBJ7 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 COX6CP13-201ENST00000428703 226 ntBASIC5.26□□□□□ -1.57
USP29Q9HBJ7 AC073648.4-201ENST00000442655 781 ntBASIC5.26□□□□□ -1.57
USP29Q9HBJ7 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 AC079203.1-201ENST00000487972 404 ntBASIC5.26□□□□□ -1.57
USP29Q9HBJ7 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 AC023050.2-201ENST00000544968 387 ntBASIC5.26□□□□□ -1.57
USP29Q9HBJ7 AC092490.3-201ENST00000545370 572 ntBASIC5.26□□□□□ -1.57
USP29Q9HBJ7 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 AC122134.1-201ENST00000565664 1104 ntBASIC5.26□□□□□ -1.57
USP29Q9HBJ7 AC008088.1-201ENST00000580993 280 ntBASIC5.26□□□□□ -1.57
USP29Q9HBJ7 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 AP000648.2-201ENST00000624182 404 ntBASIC5.26□□□□□ -1.57
USP29Q9HBJ7 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.26□□□□□ -1.57
USP29Q9HBJ7 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
USP29Q9HBJ7 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.25□□□□□ -1.57
USP29Q9HBJ7 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
USP29Q9HBJ7 AL022393.1-201ENST00000625142 1677 ntBASIC5.25□□□□□ -1.57
USP29Q9HBJ7 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
USP29Q9HBJ7 AC103591.2-201ENST00000265259 766 ntBASIC5.25□□□□□ -1.57
USP29Q9HBJ7 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms