Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
FOXP3Q9BZS1 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.15□□□□□ -1.43
FOXP3Q9BZS1 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
FOXP3Q9BZS1 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
FOXP3Q9BZS1 TEX21P-201ENST00000447107 1476 ntBASIC6.15□□□□□ -1.43
FOXP3Q9BZS1 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.15□□□□□ -1.43
FOXP3Q9BZS1 AC068870.3-201ENST00000625077 2536 ntBASIC6.15□□□□□ -1.43
FOXP3Q9BZS1 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 AL034546.1-201ENST00000623740 3693 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 MTND5P26-201ENST00000426018 1752 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 NLRP3P1-201ENST00000622303 1785 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 Y_RNA.11-201ENST00000362375 109 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 Y_RNA.302-201ENST00000364997 102 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 RPL17P50-201ENST00000396131 546 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 RNU6-77P-201ENST00000410554 91 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 MTCO1P17-201ENST00000411522 491 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 Z97055.1-201ENST00000419730 712 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 RPS3P2-201ENST00000421346 701 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 AP001324.1-201ENST00000428553 399 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 SEPT7P5-201ENST00000434048 306 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 PAXBP1P1-201ENST00000449315 447 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 RPL23AP35-201ENST00000451906 501 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 AL133351.3-201ENST00000454998 193 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 SEPT7P3-201ENST00000455017 621 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 AC073522.1-201ENST00000483312 377 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 DYNLL1P6-201ENST00000503440 264 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 AC138409.2-202ENST00000507274 458 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 IGKV3D-34-201ENST00000522638 302 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 AP001646.1-201ENST00000527936 915 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 MIR4528-201ENST00000577763 90 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 AC008507.3-201ENST00000585753 472 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 AC012065.4-201ENST00000602445 679 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 AL133481.2-203ENST00000607558 139 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 AC006840.1-201ENST00000623069 542 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 AL356596.1-201ENST00000624230 379 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 AC005618.4-201ENST00000625053 554 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 PROS2P-201ENST00000474651 1951 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 EIF3EP1-201ENST00000433978 1316 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 AC140134.1-201ENST00000511830 3544 ntBASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
FOXP3Q9BZS1 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
FOXP3Q9BZS1 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
FOXP3Q9BZS1 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
FOXP3Q9BZS1 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
FOXP3Q9BZS1 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
FOXP3Q9BZS1 OR9G4-201ENST00000302957 984 ntBASIC6.13□□□□□ -1.43
FOXP3Q9BZS1 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
FOXP3Q9BZS1 RNU6-1339P-201ENST00000363574 91 ntBASIC6.13□□□□□ -1.43
FOXP3Q9BZS1 RNU6-660P-201ENST00000364566 109 ntBASIC6.13□□□□□ -1.43
FOXP3Q9BZS1 RNA5SP211-201ENST00000365516 117 ntBASIC6.13□□□□□ -1.43
FOXP3Q9BZS1 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
FOXP3Q9BZS1 SNORA51.9-201ENST00000384295 124 ntBASIC6.13□□□□□ -1.43
FOXP3Q9BZS1 Y_RNA.554-201ENST00000384672 102 ntBASIC6.13□□□□□ -1.43
FOXP3Q9BZS1 MIR181A1-201ENST00000385026 110 ntBASIC6.13□□□□□ -1.43
FOXP3Q9BZS1 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.13□□□□□ -1.43
FOXP3Q9BZS1 RN7SKP144-201ENST00000411108 279 ntBASIC6.13□□□□□ -1.43
FOXP3Q9BZS1 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC6.13□□□□□ -1.43
FOXP3Q9BZS1 HMGN1P20-201ENST00000411849 300 ntBASIC6.13□□□□□ -1.43
FOXP3Q9BZS1 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.13□□□□□ -1.43
FOXP3Q9BZS1 CRIP1P1-201ENST00000427567 185 ntBASIC6.13□□□□□ -1.43
FOXP3Q9BZS1 BLOC1S2P1-201ENST00000428431 301 ntBASIC6.13□□□□□ -1.43
FOXP3Q9BZS1 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC6.13□□□□□ -1.43
FOXP3Q9BZS1 FTH1P16-201ENST00000435241 552 ntBASIC6.13□□□□□ -1.43
FOXP3Q9BZS1 AL512286.1-201ENST00000439244 400 ntBASIC6.13□□□□□ -1.43
FOXP3Q9BZS1 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms