Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 ATP1B1P1-201ENST00000509767 915 ntBASIC5.2□□□□□ -1.58
UPF3BQ9BZI7 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
UPF3BQ9BZI7 MIR2116-201ENST00000517221 80 ntBASIC5.2□□□□□ -1.58
UPF3BQ9BZI7 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.2□□□□□ -1.58
UPF3BQ9BZI7 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.2□□□□□ -1.58
UPF3BQ9BZI7 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.2□□□□□ -1.58
UPF3BQ9BZI7 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.2□□□□□ -1.58
UPF3BQ9BZI7 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.2□□□□□ -1.58
UPF3BQ9BZI7 MTND6P33-201ENST00000571794 183 ntBASIC5.2□□□□□ -1.58
UPF3BQ9BZI7 AC069061.3-201ENST00000582254 823 ntBASIC5.2□□□□□ -1.58
UPF3BQ9BZI7 KPNA2P3-201ENST00000584190 848 ntBASIC5.2□□□□□ -1.58
UPF3BQ9BZI7 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.2□□□□□ -1.58
UPF3BQ9BZI7 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
UPF3BQ9BZI7 AC007546.1-201ENST00000619452 559 ntBASIC5.2□□□□□ -1.58
UPF3BQ9BZI7 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.2□□□□□ -1.58
UPF3BQ9BZI7 AC011944.2-201ENST00000624440 683 ntBASIC5.2□□□□□ -1.58
UPF3BQ9BZI7 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
UPF3BQ9BZI7 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 AC245100.2-201ENST00000454544 1679 ntBASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 SNORD66.1-201ENST00000391230 76 ntBASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 AC025750.1-201ENST00000399891 379 ntBASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 SNORA79B-201ENST00000410557 148 ntBASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 GAPDHP49-201ENST00000421421 961 ntBASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 AL451062.2-201ENST00000427515 271 ntBASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 AC006946.1-201ENST00000429106 328 ntBASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 AC114495.1-201ENST00000441274 436 ntBASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 GEMIN8P3-201ENST00000445417 720 ntBASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 RPL7AP10-201ENST00000481016 791 ntBASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 PPBPP1-201ENST00000510807 373 ntBASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 AC084783.1-201ENST00000565846 910 ntBASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 AL121834.1-201ENST00000572284 509 ntBASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 FP325313.1-201ENST00000638228 703 ntBASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 AC125257.1-201ENST00000560400 2930 ntBASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
UPF3BQ9BZI7 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 RNU1-94P-201ENST00000362627 173 ntBASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 AL672167.2-201ENST00000377164 879 ntBASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 SNORA37-201ENST00000384504 129 ntBASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 MIR134-201ENST00000385258 73 ntBASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 GSTM3P2-201ENST00000412746 530 ntBASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 TMSB10P2-201ENST00000416049 131 ntBASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 PRELID3BP10-201ENST00000431957 584 ntBASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 ABCF2P2-201ENST00000450549 296 ntBASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 RPL7P22-201ENST00000466005 733 ntBASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 AC053481.1-201ENST00000467217 306 ntBASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 RPS26P28-201ENST00000470806 348 ntBASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 AC015795.1-201ENST00000513669 327 ntBASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 AP000827.1-201ENST00000527814 258 ntBASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 MED28P5-201ENST00000528254 438 ntBASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 OR5BC1P-201ENST00000529327 739 ntBASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 AP005119.2-201ENST00000579735 1105 ntBASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 AC079587.1-201ENST00000603846 277 ntBASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 AC115286.1-201ENST00000604298 434 ntBASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 AL354984.3-201ENST00000604803 325 ntBASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 AL035461.2-201ENST00000619201 524 ntBASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 AC002044.3-201ENST00000623314 541 ntBASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.18□□□□□ -1.58
UPF3BQ9BZI7 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms