Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
PKP4Q99569 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PKP4Q99569 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
PKP4Q99569 AC000123.3-201ENST00000624029 4975 ntBASIC4.81□□□□□ -1.64
PKP4Q99569 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PKP4Q99569 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PKP4Q99569 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PKP4Q99569 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PKP4Q99569 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PKP4Q99569 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.81□□□□□ -1.64
PKP4Q99569 RNU4-40P-201ENST00000364351 143 ntBASIC4.81□□□□□ -1.64
PKP4Q99569 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PKP4Q99569 GSTM3P2-201ENST00000412746 530 ntBASIC4.81□□□□□ -1.64
PKP4Q99569 AC013404.1-201ENST00000413068 249 ntBASIC4.81□□□□□ -1.64
PKP4Q99569 AC016769.2-201ENST00000414815 475 ntBASIC4.81□□□□□ -1.64
PKP4Q99569 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.81□□□□□ -1.64
PKP4Q99569 AC019050.1-201ENST00000418508 492 ntBASIC4.81□□□□□ -1.64
PKP4Q99569 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.81□□□□□ -1.64
PKP4Q99569 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PKP4Q99569 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.81□□□□□ -1.64
PKP4Q99569 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.81□□□□□ -1.64
PKP4Q99569 RBMY2QP-201ENST00000429799 1147 ntBASIC4.81□□□□□ -1.64
PKP4Q99569 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.81□□□□□ -1.64
PKP4Q99569 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PKP4Q99569 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.81□□□□□ -1.64
PKP4Q99569 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PKP4Q99569 CEACAMP7-201ENST00000444105 496 ntBASIC4.81□□□□□ -1.64
PKP4Q99569 HMGB1P5-202ENST00000451497 985 ntBASIC4.81□□□□□ -1.64
PKP4Q99569 RPL7P61-201ENST00000451721 751 ntBASIC4.81□□□□□ -1.64
PKP4Q99569 snoU13.20-201ENST00000459180 104 ntBASIC4.81□□□□□ -1.64
PKP4Q99569 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.81□□□□□ -1.64
PKP4Q99569 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.81□□□□□ -1.64
PKP4Q99569 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
PKP4Q99569 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.81□□□□□ -1.64
PKP4Q99569 AC110775.1-201ENST00000513721 462 ntBASIC4.81□□□□□ -1.64
PKP4Q99569 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.81□□□□□ -1.64
PKP4Q99569 AC027308.1-201ENST00000517993 110 ntBASIC4.81□□□□□ -1.64
PKP4Q99569 RPL23AP53-201ENST00000521854 457 ntBASIC4.81□□□□□ -1.64
PKP4Q99569 AC010376.1-201ENST00000522101 334 ntBASIC4.81□□□□□ -1.64
PKP4Q99569 OR8G5-201ENST00000524943 1041 ntBASIC4.81□□□□□ -1.64
PKP4Q99569 AP003066.2-201ENST00000529375 555 ntBASIC4.81□□□□□ -1.64
PKP4Q99569 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PKP4Q99569 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.81□□□□□ -1.64
PKP4Q99569 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.81□□□□□ -1.64
PKP4Q99569 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.81□□□□□ -1.64
PKP4Q99569 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
PKP4Q99569 TVP23CP2-201ENST00000571473 623 ntBASIC4.81□□□□□ -1.64
PKP4Q99569 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.81□□□□□ -1.64
PKP4Q99569 AC090666.1-201ENST00000578241 445 ntBASIC4.81□□□□□ -1.64
PKP4Q99569 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.81□□□□□ -1.64
PKP4Q99569 AC005242.1-201ENST00000585658 438 ntBASIC4.81□□□□□ -1.64
PKP4Q99569 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.81□□□□□ -1.64
PKP4Q99569 ELOCP35-201ENST00000604289 336 ntBASIC4.81□□□□□ -1.64
PKP4Q99569 AC104687.2-201ENST00000604442 342 ntBASIC4.81□□□□□ -1.64
PKP4Q99569 AC112503.1-201ENST00000608436 391 ntBASIC4.81□□□□□ -1.64
PKP4Q99569 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
PKP4Q99569 MIR7973-1-201ENST00000614683 76 ntBASIC4.81□□□□□ -1.64
PKP4Q99569 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.81□□□□□ -1.64
PKP4Q99569 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.81□□□□□ -1.64
PKP4Q99569 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.81□□□□□ -1.64
PKP4Q99569 AC019206.1-201ENST00000621938 425 ntBASIC4.81□□□□□ -1.64
PKP4Q99569 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
PKP4Q99569 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PKP4Q99569 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.81□□□□□ -1.64
PKP4Q99569 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PKP4Q99569 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PKP4Q99569 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.81□□□□□ -1.64
PKP4Q99569 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.81□□□□□ -1.64
PKP4Q99569 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
PKP4Q99569 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.8□□□□□ -1.64
PKP4Q99569 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PKP4Q99569 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.8□□□□□ -1.64
PKP4Q99569 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PKP4Q99569 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PKP4Q99569 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PKP4Q99569 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PKP4Q99569 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
PKP4Q99569 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PKP4Q99569 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PKP4Q99569 RN7SKP95-201ENST00000362860 303 ntBASIC4.8□□□□□ -1.64
PKP4Q99569 RNA5SP123-201ENST00000363244 119 ntBASIC4.8□□□□□ -1.64
PKP4Q99569 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PKP4Q99569 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.8□□□□□ -1.64
PKP4Q99569 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PKP4Q99569 AL357515.1-201ENST00000402967 542 ntBASIC4.8□□□□□ -1.64
PKP4Q99569 AP002530.1-201ENST00000405705 684 ntBASIC4.8□□□□□ -1.64
PKP4Q99569 RN7SKP97-201ENST00000410966 333 ntBASIC4.8□□□□□ -1.64
PKP4Q99569 AC105402.1-201ENST00000413336 545 ntBASIC4.8□□□□□ -1.64
PKP4Q99569 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.8□□□□□ -1.64
PKP4Q99569 AL606495.1-201ENST00000422100 813 ntBASIC4.8□□□□□ -1.64
PKP4Q99569 NPM1P33-201ENST00000438918 872 ntBASIC4.8□□□□□ -1.64
PKP4Q99569 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PKP4Q99569 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.8□□□□□ -1.64
PKP4Q99569 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.8□□□□□ -1.64
PKP4Q99569 AC004453.1-201ENST00000487895 408 ntBASIC4.8□□□□□ -1.64
PKP4Q99569 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.8□□□□□ -1.64
PKP4Q99569 AC140172.1-201ENST00000502928 141 ntBASIC4.8□□□□□ -1.64
PKP4Q99569 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.8□□□□□ -1.64
PKP4Q99569 AC093720.1-201ENST00000505681 714 ntBASIC4.8□□□□□ -1.64
PKP4Q99569 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms