Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RNVU1-14-201ENST00000384770 164 ntBASIC6.9□□□□□ -1.31
IFT140Q96RY7 MIR1179-201ENST00000408703 91 ntBASIC6.9□□□□□ -1.31
IFT140Q96RY7 AC096664.2-201ENST00000411843 406 ntBASIC6.9□□□□□ -1.31
IFT140Q96RY7 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC6.9□□□□□ -1.31
IFT140Q96RY7 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.9□□□□□ -1.31
IFT140Q96RY7 AC006011.1-201ENST00000442758 349 ntBASIC6.9□□□□□ -1.31
IFT140Q96RY7 RPS4XP4-201ENST00000443195 763 ntBASIC6.9□□□□□ -1.31
IFT140Q96RY7 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC6.9□□□□□ -1.31
IFT140Q96RY7 AC104849.1-201ENST00000462623 405 ntBASIC6.9□□□□□ -1.31
IFT140Q96RY7 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC6.9□□□□□ -1.31
IFT140Q96RY7 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC6.9□□□□□ -1.31
IFT140Q96RY7 AC090312.1-201ENST00000580637 348 ntBASIC6.9□□□□□ -1.31
IFT140Q96RY7 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC6.9□□□□□ -1.31
IFT140Q96RY7 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
IFT140Q96RY7 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
IFT140Q96RY7 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
IFT140Q96RY7 AC092376.2-201ENST00000622621 4116 ntBASIC6.9□□□□□ -1.31
IFT140Q96RY7 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC6.9□□□□□ -1.31
IFT140Q96RY7 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
IFT140Q96RY7 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
IFT140Q96RY7 TET1P1-201ENST00000426627 2301 ntBASIC6.89□□□□□ -1.31
IFT140Q96RY7 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
IFT140Q96RY7 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
IFT140Q96RY7 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
IFT140Q96RY7 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
IFT140Q96RY7 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
IFT140Q96RY7 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
IFT140Q96RY7 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.89□□□□□ -1.31
IFT140Q96RY7 RPL5P2-201ENST00000429598 854 ntBASIC6.89□□□□□ -1.31
IFT140Q96RY7 AC009963.4-201ENST00000448535 339 ntBASIC6.89□□□□□ -1.31
IFT140Q96RY7 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC6.89□□□□□ -1.31
IFT140Q96RY7 YPEL5P3-201ENST00000547227 352 ntBASIC6.89□□□□□ -1.31
IFT140Q96RY7 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.89□□□□□ -1.31
IFT140Q96RY7 AL031985.2-201ENST00000600955 480 ntBASIC6.89□□□□□ -1.31
IFT140Q96RY7 MIR6868-201ENST00000611215 58 ntBASIC6.89□□□□□ -1.31
IFT140Q96RY7 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
IFT140Q96RY7 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
IFT140Q96RY7 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
IFT140Q96RY7 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
IFT140Q96RY7 AC010300.1-201ENST00000600671 5134 ntBASIC6.89□□□□□ -1.31
IFT140Q96RY7 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
IFT140Q96RY7 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
IFT140Q96RY7 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
IFT140Q96RY7 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
IFT140Q96RY7 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
IFT140Q96RY7 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
IFT140Q96RY7 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
IFT140Q96RY7 AL450992.3-201ENST00000413192 568 ntBASIC6.88□□□□□ -1.31
IFT140Q96RY7 AC245052.5-201ENST00000416320 649 ntBASIC6.88□□□□□ -1.31
IFT140Q96RY7 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC6.88□□□□□ -1.31
IFT140Q96RY7 AC115115.1-201ENST00000449927 248 ntBASIC6.88□□□□□ -1.31
IFT140Q96RY7 PPIAP15-201ENST00000479662 484 ntBASIC6.88□□□□□ -1.31
IFT140Q96RY7 RN7SL293P-201ENST00000481765 281 ntBASIC6.88□□□□□ -1.31
IFT140Q96RY7 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC6.88□□□□□ -1.31
IFT140Q96RY7 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.88□□□□□ -1.31
IFT140Q96RY7 AC110743.1-201ENST00000584870 478 ntBASIC6.88□□□□□ -1.31
IFT140Q96RY7 HMGB2P1-201ENST00000591146 634 ntBASIC6.88□□□□□ -1.31
IFT140Q96RY7 AC005520.3-201ENST00000602874 370 ntBASIC6.88□□□□□ -1.31
IFT140Q96RY7 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
IFT140Q96RY7 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
IFT140Q96RY7 PCNP-208ENST00000627393 136 ntTSL 2 BASIC6.88□□□□□ -1.31
IFT140Q96RY7 AP001153.1-201ENST00000641024 338 ntBASIC6.88□□□□□ -1.31
IFT140Q96RY7 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
IFT140Q96RY7 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
IFT140Q96RY7 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
IFT140Q96RY7 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
IFT140Q96RY7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
IFT140Q96RY7 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
IFT140Q96RY7 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC6.87□□□□□ -1.31
IFT140Q96RY7 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
IFT140Q96RY7 ERCC6-202ENST00000374127 1782 ntBASIC6.87□□□□□ -1.31
IFT140Q96RY7 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
IFT140Q96RY7 RNU2-65P-201ENST00000410162 185 ntBASIC6.87□□□□□ -1.31
IFT140Q96RY7 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC6.87□□□□□ -1.31
IFT140Q96RY7 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.87□□□□□ -1.31
IFT140Q96RY7 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC6.87□□□□□ -1.31
IFT140Q96RY7 AC104306.1-201ENST00000449702 371 ntBASIC6.87□□□□□ -1.31
IFT140Q96RY7 RPS11P1-201ENST00000451072 473 ntBASIC6.87□□□□□ -1.31
IFT140Q96RY7 FCF1P7-201ENST00000451185 558 ntBASIC6.87□□□□□ -1.31
IFT140Q96RY7 UBE2CP3-201ENST00000502715 450 ntBASIC6.87□□□□□ -1.31
IFT140Q96RY7 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC6.87□□□□□ -1.31
IFT140Q96RY7 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC6.87□□□□□ -1.31
IFT140Q96RY7 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC6.87□□□□□ -1.31
IFT140Q96RY7 AC091905.2-201ENST00000623143 306 ntBASIC6.87□□□□□ -1.31
IFT140Q96RY7 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
IFT140Q96RY7 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
IFT140Q96RY7 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.87□□□□□ -1.31
IFT140Q96RY7 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
IFT140Q96RY7 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.87□□□□□ -1.31
IFT140Q96RY7 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
IFT140Q96RY7 ADAM5-202ENST00000399789 1942 ntBASIC6.86□□□□□ -1.31
IFT140Q96RY7 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
IFT140Q96RY7 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
IFT140Q96RY7 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
IFT140Q96RY7 RPL7P4-203ENST00000430239 730 ntBASIC6.86□□□□□ -1.31
IFT140Q96RY7 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC6.86□□□□□ -1.31
IFT140Q96RY7 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.86□□□□□ -1.31
IFT140Q96RY7 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC6.86□□□□□ -1.31
IFT140Q96RY7 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.86□□□□□ -1.31
IFT140Q96RY7 AC127024.5-201ENST00000580085 462 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms