Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 MIR6868-201ENST00000611215 58 ntBASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 AL353726.1-201ENST00000614041 1000 ntBASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 AL592291.1-201ENST00000403830 352 ntBASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 AC005034.4-201ENST00000603612 899 ntBASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 NXPH1-205ENST00000602349 1953 ntBASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 AL513548.1-201ENST00000562904 1724 ntBASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 AL359922.3-201ENST00000624779 1670 ntBASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 RNU1-33P-201ENST00000364249 162 ntBASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 AC004938.1-201ENST00000438468 308 ntBASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 MIR3922-201ENST00000585192 84 ntBASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 AC244505.7-201ENST00000599675 272 ntBASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 IMMP1LP1-201ENST00000605170 488 ntBASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 AL669831.5-218ENST00000591702 1873 ntBASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 AC022417.1-201ENST00000624768 1303 ntBASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 RNA5SP126-201ENST00000365092 109 ntBASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 SNORA48.5-201ENST00000391143 135 ntBASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 AL160175.1-201ENST00000428124 247 ntBASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 AL033523.1-201ENST00000605153 153 ntBASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.45□□□□□ -1.86
CSMD1Q96PZ7 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 RNU11-201ENST00000387069 134 ntBASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 AC009963.4-201ENST00000448535 339 ntBASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 AC092691.2-201ENST00000461787 803 ntBASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 AL360012.1-201ENST00000602813 131 ntBASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 AL591135.1-201ENST00000401578 5914 ntBASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 CTSL3P-202ENST00000412179 788 ntBASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 AJ239321.1-201ENST00000424255 564 ntBASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 AC106707.2-201ENST00000484182 374 ntBASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 GNRHR2P1-201ENST00000555315 631 ntBASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 AL031666.3-201ENST00000609320 1006 ntBASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 OR51H2P-202ENST00000641424 3046 ntBASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CSMD1Q96PZ7 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 RPS26P4-201ENST00000431743 355 ntBASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 HSPD1P21-201ENST00000436541 245 ntBASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 AGGF1P3-201ENST00000493675 1213 ntBASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms