Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 Y_RNA.61-201ENST00000362835 102 ntBASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 Y_RNA.311-201ENST00000365068 96 ntBASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 SNORA11C-201ENST00000408532 129 ntBASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 FAR2P2-201ENST00000413041 594 ntBASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 MRPL53P1-201ENST00000414323 319 ntBASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 MTATP6P27-201ENST00000416987 621 ntBASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 SLC44A3-AS1-205ENST00000424505 612 ntBASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 FAR2P4-202ENST00000425399 584 ntBASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 AL591363.1-201ENST00000450091 483 ntBASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 MTCO3P11-201ENST00000455103 774 ntBASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 AC093166.4-201ENST00000457867 318 ntBASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 AC099521.1-201ENST00000482557 334 ntBASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 FAM92A1P2-202ENST00000504766 877 ntBASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 AC006499.3-201ENST00000506077 748 ntBASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 AC093824.1-201ENST00000508796 343 ntBASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 CYP4F27P-201ENST00000514557 494 ntBASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 GLYCAM1-201ENST00000546596 285 ntBASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 GSTP1P1-201ENST00000548078 319 ntBASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 GTF2IP22-201ENST00000554443 182 ntBASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 ANP32BP3-201ENST00000559213 706 ntBASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 MIR4528-201ENST00000577763 90 ntBASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 AC127024.5-201ENST00000580085 462 ntBASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 FGF7P1-201ENST00000582820 288 ntBASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 MIR548AB-201ENST00000584917 84 ntBASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 AC007038.2-201ENST00000608095 740 ntBASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 AC007497.1-201ENST00000610421 561 ntBASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 AL445670.1-201ENST00000618889 801 ntBASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 MTND5P26-201ENST00000426018 1752 ntBASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 PABPC1P9-201ENST00000426076 1612 ntBASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 ZNF658B-201ENST00000602828 3408 ntBASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 MTND4P12-201ENST00000498999 1377 ntBASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 GAPDHP24-201ENST00000328713 983 ntBASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 RNU1-59P-201ENST00000364829 162 ntBASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 Y_RNA.408-201ENST00000383987 102 ntBASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 RNU5A-6P-201ENST00000384136 116 ntBASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 RPS27AP11-201ENST00000402798 447 ntBASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 AL596448.1-201ENST00000415024 392 ntBASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 RPS4XP5-201ENST00000419038 768 ntBASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 AL662874.1-201ENST00000426065 230 ntBASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 AC099677.3-201ENST00000427081 395 ntBASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 RPS25P9-201ENST00000435591 252 ntBASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 H3F3BP1-201ENST00000440551 403 ntBASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 SDC4P-201ENST00000453285 601 ntBASIC6.7□□□□□ -1.34
SYNGAP1Q96PV0 RANP1-206ENST00000455094 651 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms