Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 PWAR1-201ENST00000624188 2414 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS50Q96JG6 AC017079.1-201ENST00000333650 415 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 RNU6-1214P-201ENST00000363650 109 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 RNU1-87P-201ENST00000363727 170 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VPS50Q96JG6 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS50Q96JG6 MIR320B1-201ENST00000390209 79 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 SNORA68.2-201ENST00000391263 128 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 PPIAP9-201ENST00000403866 498 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 RN7SKP222-201ENST00000410651 315 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 AC027644.1-201ENST00000419595 298 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 RIMKLBP2-201ENST00000424737 654 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 NANOGP4-201ENST00000427230 913 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 FTH1P16-201ENST00000435241 552 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 HMGB1P45-201ENST00000435986 653 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 AC245028.2-201ENST00000458673 253 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 HPRT1P2-201ENST00000505250 544 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 AC010486.2-201ENST00000505572 483 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 IMPA1P1-201ENST00000510718 842 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 SCARNA16.4-201ENST00000516956 187 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 MTCO3P15-201ENST00000526563 574 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 AC008083.2-201ENST00000546707 476 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 MTCO1P40-201ENST00000574371 625 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 FKBP1AP1-201ENST00000594588 318 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 VN1R83P-201ENST00000595685 445 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 AL583856.2-201ENST00000606298 543 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 AL445423.1-201ENST00000609941 536 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 AL121612.2-201ENST00000612261 482 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 VN1R7P-201ENST00000619242 903 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 AC007342.8-201ENST00000623278 678 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 AL590763.1-201ENST00000398297 1545 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS50Q96JG6 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VPS50Q96JG6 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VPS50Q96JG6 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 AL450345.1-202ENST00000605741 3881 ntBASIC5.21□□□□□ -1.58
VPS50Q96JG6 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS50Q96JG6 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS50Q96JG6 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS50Q96JG6 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VPS50Q96JG6 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS50Q96JG6 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
VPS50Q96JG6 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS50Q96JG6 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VPS50Q96JG6 AC005261.4-201ENST00000600047 1385 ntBASIC5.2□□□□□ -1.58
VPS50Q96JG6 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VPS50Q96JG6 AC005294.1-201ENST00000355509 281 ntBASIC5.2□□□□□ -1.58
VPS50Q96JG6 SNORD116.1-201ENST00000365628 92 ntBASIC5.2□□□□□ -1.58
VPS50Q96JG6 RNU6-98P-201ENST00000384173 107 ntBASIC5.2□□□□□ -1.58
VPS50Q96JG6 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VPS50Q96JG6 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS50Q96JG6 COX5BP7-201ENST00000414780 274 ntBASIC5.2□□□□□ -1.58
VPS50Q96JG6 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS50Q96JG6 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS50Q96JG6 AL133325.1-201ENST00000421090 382 ntBASIC5.2□□□□□ -1.58
VPS50Q96JG6 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS50Q96JG6 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS50Q96JG6 RPL12P17-201ENST00000432393 498 ntBASIC5.2□□□□□ -1.58
VPS50Q96JG6 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS50Q96JG6 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS50Q96JG6 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS50Q96JG6 AC105399.1-202ENST00000447303 205 ntBASIC5.2□□□□□ -1.58
VPS50Q96JG6 Z99714.1-201ENST00000450463 807 ntBASIC5.2□□□□□ -1.58
VPS50Q96JG6 OTX2P1-201ENST00000450956 354 ntBASIC5.2□□□□□ -1.58
VPS50Q96JG6 AC243772.1-201ENST00000451620 410 ntBASIC5.2□□□□□ -1.58
VPS50Q96JG6 RPS26P39-201ENST00000469206 341 ntBASIC5.2□□□□□ -1.58
VPS50Q96JG6 RPL35AP19-201ENST00000469425 329 ntBASIC5.2□□□□□ -1.58
VPS50Q96JG6 RPL23AP44-201ENST00000482216 473 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms