Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RARSP1-201ENST00000542842 1418 ntBASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 AC134882.1-201ENST00000603738 1676 ntBASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 Z73965.1-201ENST00000623412 2297 ntBASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 RPL7P16-201ENST00000479738 738 ntBASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 AC091868.1-201ENST00000508746 304 ntBASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 AC090819.1-201ENST00000523800 1111 ntBASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 AC021006.3-201ENST00000530771 192 ntBASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 EDDM3DP-201ENST00000554692 434 ntBASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 AL121594.4-201ENST00000556211 1196 ntBASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 PCNAP1-202ENST00000595299 752 ntBASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 COX6CP4-201ENST00000605798 228 ntBASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 AP000894.4-201ENST00000610185 483 ntBASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 LINC01109-201ENST00000603837 3081 ntBASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.64□□□□□ -1.67
PDLIM5Q96HC4 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 AC074029.4-201ENST00000624796 1859 ntBASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 AL442639.1-201ENST00000625030 1899 ntBASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 OR52E6-202ENST00000379946 954 ntBASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 ARL2BPP3-201ENST00000421226 480 ntBASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 AL031736.2-201ENST00000426573 787 ntBASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 BX119904.1-201ENST00000432026 348 ntBASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 NRBF2P3-201ENST00000432731 865 ntBASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 PSMD10P3-201ENST00000437000 448 ntBASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 MTND4P15-201ENST00000437913 1033 ntBASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 AP000949.1-201ENST00000438328 629 ntBASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 SDR42E1P3-201ENST00000438345 502 ntBASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 MTCYBP21-201ENST00000443300 1113 ntBASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 AC110749.1-201ENST00000462007 357 ntBASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 NPM1P17-201ENST00000479221 602 ntBASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 RN7SL214P-201ENST00000487317 265 ntBASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 AC004453.1-201ENST00000487895 408 ntBASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 MTND1P36-201ENST00000522384 936 ntBASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 CIR1P1-201ENST00000524055 1133 ntBASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 AC015912.2-201ENST00000571053 181 ntBASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 AL391358.1-201ENST00000605342 190 ntBASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 AL450270.1-201ENST00000606160 391 ntBASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 AL445222.1-201ENST00000607259 628 ntBASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 AL353600.1-201ENST00000608148 251 ntBASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 AL391262.2-201ENST00000622466 494 ntBASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 AL137100.1-201ENST00000556703 1620 ntBASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 AC007529.1-201ENST00000418574 2178 ntBASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDLIM5Q96HC4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
PDLIM5Q96HC4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.62□□□□□ -1.67
PDLIM5Q96HC4 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.62□□□□□ -1.67
PDLIM5Q96HC4 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDLIM5Q96HC4 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
PDLIM5Q96HC4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDLIM5Q96HC4 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PDLIM5Q96HC4 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDLIM5Q96HC4 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms