Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 MAPK10-303ENST00000641324 3959 ntBASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 AC093719.1-202ENST00000392735 373 ntBASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 RN7SKP167-201ENST00000411047 285 ntBASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 GAPDHP49-201ENST00000421421 961 ntBASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 UBE2V2P1-201ENST00000434717 398 ntBASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 CCDC75P1-201ENST00000469247 791 ntBASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 AC037198.2-201ENST00000478845 733 ntBASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 AC090013.1-201ENST00000485147 480 ntBASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 ARL4AP1-201ENST00000503220 705 ntBASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 AC093840.1-201ENST00000511599 336 ntBASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 TRAV8-5-201ENST00000537369 341 ntBASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 HMGB3P26-201ENST00000560051 582 ntBASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 ATP5J2P6-201ENST00000565203 266 ntBASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 AP005901.4-201ENST00000577336 569 ntBASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 AL160290.3-201ENST00000604869 165 ntBASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 AL592494.3-201ENST00000609485 464 ntBASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 AL353726.1-201ENST00000614041 1000 ntBASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.41□□□□□ -1.7
ECHDC3Q96DC8 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
ECHDC3Q96DC8 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.4□□□□□ -1.7
ECHDC3Q96DC8 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ECHDC3Q96DC8 OR10J6P-201ENST00000289731 930 ntBASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 RNU1-44P-201ENST00000384453 163 ntBASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 AL078604.1-201ENST00000404609 466 ntBASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 AC004690.1-201ENST00000418216 328 ntBASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 RPEP2-201ENST00000432149 701 ntBASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 MTND2P2-201ENST00000434633 945 ntBASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 RPL7P32-201ENST00000457119 744 ntBASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 RN7SL303P-201ENST00000469773 251 ntBASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 ATP1B1P1-201ENST00000509767 915 ntBASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 AC015922.4-201ENST00000612568 690 ntBASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 AC011944.2-201ENST00000624440 683 ntBASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 AC140479.6-201ENST00000633535 357 ntBASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ECHDC3Q96DC8 SYT14P1-202ENST00000600441 1448 ntBASIC4.39□□□□□ -1.71
ECHDC3Q96DC8 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.39□□□□□ -1.71
ECHDC3Q96DC8 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.39□□□□□ -1.71
ECHDC3Q96DC8 AC105074.1-201ENST00000623380 3095 ntBASIC4.39□□□□□ -1.71
ECHDC3Q96DC8 AC006971.1-201ENST00000407916 4486 ntBASIC4.39□□□□□ -1.71
ECHDC3Q96DC8 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.39□□□□□ -1.71
ECHDC3Q96DC8 FAM3C2-201ENST00000312214 681 ntBASIC4.39□□□□□ -1.71
ECHDC3Q96DC8 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
ECHDC3Q96DC8 AC097374.1-203ENST00000400783 485 ntBASIC4.39□□□□□ -1.71
ECHDC3Q96DC8 RPS20P14-201ENST00000412545 360 ntBASIC4.39□□□□□ -1.71
ECHDC3Q96DC8 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.39□□□□□ -1.71
ECHDC3Q96DC8 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.39□□□□□ -1.71
ECHDC3Q96DC8 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.39□□□□□ -1.71
ECHDC3Q96DC8 RCC2P2-201ENST00000422174 918 ntBASIC4.39□□□□□ -1.71
ECHDC3Q96DC8 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.39□□□□□ -1.71
ECHDC3Q96DC8 IPMKP1-201ENST00000425988 855 ntBASIC4.39□□□□□ -1.71
ECHDC3Q96DC8 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.39□□□□□ -1.71
ECHDC3Q96DC8 AC073143.1-201ENST00000436316 395 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms