Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC008494.2-201ENST00000514544 370 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 HMGB1P23-201ENST00000518743 568 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 DYNLL1P4-201ENST00000549314 266 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 AC011477.5-201ENST00000586571 259 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 IMMP1LP1-201ENST00000605170 488 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 AC092574.1-201ENST00000609771 420 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 AC079395.2-201ENST00000610982 737 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 CFTRP2-201ENST00000634304 199 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 ECM1P2-201ENST00000503354 1577 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 AC092435.4-201ENST00000623012 4159 ntBASIC4.69□□□□□ -1.66
VPS33AQ96AX1 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 SNORA17A-201ENST00000391185 133 ntBASIC4.69□□□□□ -1.66
VPS33AQ96AX1 DUTP5-201ENST00000406790 469 ntBASIC4.69□□□□□ -1.66
VPS33AQ96AX1 MIR1282-201ENST00000408865 101 ntBASIC4.69□□□□□ -1.66
VPS33AQ96AX1 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.69□□□□□ -1.66
VPS33AQ96AX1 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 AC092809.1-201ENST00000441469 474 ntBASIC4.69□□□□□ -1.66
VPS33AQ96AX1 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 AL354714.3-201ENST00000447284 493 ntBASIC4.69□□□□□ -1.66
VPS33AQ96AX1 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 RPL7P31-201ENST00000450192 724 ntBASIC4.69□□□□□ -1.66
VPS33AQ96AX1 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 GTF2IP12-201ENST00000456547 356 ntBASIC4.69□□□□□ -1.66
VPS33AQ96AX1 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 AC104689.1-201ENST00000473356 768 ntBASIC4.69□□□□□ -1.66
VPS33AQ96AX1 AC011037.1-201ENST00000483964 558 ntBASIC4.69□□□□□ -1.66
VPS33AQ96AX1 UBA52P7-201ENST00000486088 380 ntBASIC4.69□□□□□ -1.66
VPS33AQ96AX1 PPM1AP1-201ENST00000502740 1135 ntBASIC4.69□□□□□ -1.66
VPS33AQ96AX1 AF186190.1-201ENST00000517470 480 ntBASIC4.69□□□□□ -1.66
VPS33AQ96AX1 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 OR5AN2P-201ENST00000534535 896 ntBASIC4.69□□□□□ -1.66
VPS33AQ96AX1 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 PDCD5P1-201ENST00000543528 309 ntBASIC4.69□□□□□ -1.66
VPS33AQ96AX1 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 FKBP1AP1-201ENST00000594588 318 ntBASIC4.69□□□□□ -1.66
VPS33AQ96AX1 AC010857.1-201ENST00000606398 594 ntBASIC4.69□□□□□ -1.66
VPS33AQ96AX1 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 AP000943.4-201ENST00000622912 357 ntBASIC4.69□□□□□ -1.66
VPS33AQ96AX1 AC015804.1-201ENST00000622935 435 ntBASIC4.69□□□□□ -1.66
VPS33AQ96AX1 AC068880.4-201ENST00000623082 495 ntBASIC4.69□□□□□ -1.66
VPS33AQ96AX1 SNORA17.5-201ENST00000630429 132 ntBASIC4.69□□□□□ -1.66
VPS33AQ96AX1 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 AC017104.5-201ENST00000637647 639 ntBASIC4.69□□□□□ -1.66
VPS33AQ96AX1 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 TLK1P1-201ENST00000456760 2440 ntBASIC4.69□□□□□ -1.66
VPS33AQ96AX1 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 NSRP1P1-201ENST00000444067 1693 ntBASIC4.69□□□□□ -1.66
VPS33AQ96AX1 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS33AQ96AX1 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 ASNSP1-204ENST00000641977 1664 ntBASIC4.68□□□□□ -1.66
VPS33AQ96AX1 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 SNORA63.3-201ENST00000362682 132 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms