Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.66□□□□□ -1.66
RFWD3Q6PCD5 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.66□□□□□ -1.66
RFWD3Q6PCD5 ADAD1P2-201ENST00000588476 646 ntBASIC4.66□□□□□ -1.66
RFWD3Q6PCD5 AL356218.2-201ENST00000605264 187 ntBASIC4.66□□□□□ -1.66
RFWD3Q6PCD5 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.66□□□□□ -1.66
RFWD3Q6PCD5 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.66□□□□□ -1.66
RFWD3Q6PCD5 AC003001.2-201ENST00000616294 831 ntBASIC4.66□□□□□ -1.66
RFWD3Q6PCD5 AL669942.2-201ENST00000620352 697 ntBASIC4.66□□□□□ -1.66
RFWD3Q6PCD5 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RFWD3Q6PCD5 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RFWD3Q6PCD5 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RFWD3Q6PCD5 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.66□□□□□ -1.66
RFWD3Q6PCD5 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RFWD3Q6PCD5 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.66□□□□□ -1.66
RFWD3Q6PCD5 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RFWD3Q6PCD5 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RFWD3Q6PCD5 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
RFWD3Q6PCD5 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.65□□□□□ -1.66
RFWD3Q6PCD5 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.65□□□□□ -1.66
RFWD3Q6PCD5 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RFWD3Q6PCD5 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RFWD3Q6PCD5 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.65□□□□□ -1.66
RFWD3Q6PCD5 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RFWD3Q6PCD5 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
RFWD3Q6PCD5 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 RPL32P3-201ENST00000359025 275 ntBASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 RNU6-697P-201ENST00000363348 107 ntBASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 AL160275.2-201ENST00000412010 394 ntBASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 EIF4EP1-201ENST00000422311 642 ntBASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 GTF2IP2-201ENST00000424290 697 ntBASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 NIPA2P1-201ENST00000426223 976 ntBASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 C4BPAP2-201ENST00000428434 478 ntBASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 AC073143.1-201ENST00000436316 395 ntBASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 RPL23AP43-201ENST00000446445 471 ntBASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 Z95152.1-201ENST00000453556 656 ntBASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 RPS6P2-201ENST00000454208 705 ntBASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 AC104997.1-201ENST00000519761 717 ntBASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 MIR4284-201ENST00000578924 81 ntBASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 MIR7154-201ENST00000620673 73 ntBASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 CPHL1P-201ENST00000461341 3407 ntBASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
RFWD3Q6PCD5 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 MAPK10-303ENST00000641324 3959 ntBASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 RNU1-130P-201ENST00000363930 160 ntBASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 SDHCP2-201ENST00000398565 501 ntBASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 AL121834.1-202ENST00000404494 277 ntBASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 AL356387.2-201ENST00000422272 243 ntBASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 AL592293.2-201ENST00000422292 996 ntBASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 RPL12P34-201ENST00000424532 479 ntBASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 NPM1P26-201ENST00000426339 738 ntBASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 CBX1P1-201ENST00000440184 427 ntBASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 AC025181.1-201ENST00000477507 416 ntBASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 RPS27AP16-201ENST00000492222 470 ntBASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 AP000827.1-201ENST00000527814 258 ntBASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 AP003168.1-201ENST00000530091 307 ntBASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 CFTRP2-201ENST00000634304 199 ntBASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.64□□□□□ -1.67
RFWD3Q6PCD5 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms