Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 RNU1-82P-201ENST00000390851 165 ntBASIC4.25□□□□□ -1.73
NIPAL3Q6P499 AC010385.1-201ENST00000412374 256 ntBASIC4.25□□□□□ -1.73
NIPAL3Q6P499 VDAC1P9-201ENST00000412766 841 ntBASIC4.25□□□□□ -1.73
NIPAL3Q6P499 AC009237.10-201ENST00000414112 510 ntBASIC4.25□□□□□ -1.73
NIPAL3Q6P499 AL590762.4-201ENST00000425885 253 ntBASIC4.25□□□□□ -1.73
NIPAL3Q6P499 AC007559.1-201ENST00000428736 355 ntBASIC4.25□□□□□ -1.73
NIPAL3Q6P499 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
NIPAL3Q6P499 AC092447.2-201ENST00000435487 669 ntBASIC4.25□□□□□ -1.73
NIPAL3Q6P499 MTND2P25-201ENST00000449028 610 ntBASIC4.25□□□□□ -1.73
NIPAL3Q6P499 IFNWP4-201ENST00000453148 294 ntBASIC4.25□□□□□ -1.73
NIPAL3Q6P499 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NIPAL3Q6P499 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.25□□□□□ -1.73
NIPAL3Q6P499 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NIPAL3Q6P499 RPS5P7-201ENST00000456664 608 ntBASIC4.25□□□□□ -1.73
NIPAL3Q6P499 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.25□□□□□ -1.73
NIPAL3Q6P499 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.25□□□□□ -1.73
NIPAL3Q6P499 RNU1-6P-201ENST00000516290 144 ntBASIC4.25□□□□□ -1.73
NIPAL3Q6P499 NPM1P6-201ENST00000521088 871 ntBASIC4.25□□□□□ -1.73
NIPAL3Q6P499 BUD31P1-201ENST00000521828 359 ntBASIC4.25□□□□□ -1.73
NIPAL3Q6P499 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.25□□□□□ -1.73
NIPAL3Q6P499 AC004923.2-201ENST00000529649 369 ntBASIC4.25□□□□□ -1.73
NIPAL3Q6P499 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.25□□□□□ -1.73
NIPAL3Q6P499 AP001880.2-201ENST00000538233 448 ntBASIC4.25□□□□□ -1.73
NIPAL3Q6P499 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.25□□□□□ -1.73
NIPAL3Q6P499 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.25□□□□□ -1.73
NIPAL3Q6P499 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.25□□□□□ -1.73
NIPAL3Q6P499 CKS1BP1-201ENST00000555221 240 ntBASIC4.25□□□□□ -1.73
NIPAL3Q6P499 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.25□□□□□ -1.73
NIPAL3Q6P499 RN7SL802P-201ENST00000577858 299 ntBASIC4.25□□□□□ -1.73
NIPAL3Q6P499 MIR5699-201ENST00000578903 90 ntBASIC4.25□□□□□ -1.73
NIPAL3Q6P499 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.25□□□□□ -1.73
NIPAL3Q6P499 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.25□□□□□ -1.73
NIPAL3Q6P499 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
NIPAL3Q6P499 AL008729.2-201ENST00000606393 473 ntBASIC4.25□□□□□ -1.73
NIPAL3Q6P499 AC026979.4-201ENST00000606555 645 ntBASIC4.25□□□□□ -1.73
NIPAL3Q6P499 AC091979.2-201ENST00000607514 214 ntBASIC4.25□□□□□ -1.73
NIPAL3Q6P499 AC123768.4-201ENST00000616244 701 ntBASIC4.25□□□□□ -1.73
NIPAL3Q6P499 AC025016.1-201ENST00000616746 682 ntBASIC4.25□□□□□ -1.73
NIPAL3Q6P499 AL356490.1-201ENST00000623079 479 ntBASIC4.25□□□□□ -1.73
NIPAL3Q6P499 AC011815.3-201ENST00000624194 473 ntBASIC4.25□□□□□ -1.73
NIPAL3Q6P499 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.25□□□□□ -1.73
NIPAL3Q6P499 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NIPAL3Q6P499 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NIPAL3Q6P499 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.25□□□□□ -1.73
NIPAL3Q6P499 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NIPAL3Q6P499 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
NIPAL3Q6P499 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NIPAL3Q6P499 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NIPAL3Q6P499 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
NIPAL3Q6P499 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NIPAL3Q6P499 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NIPAL3Q6P499 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
NIPAL3Q6P499 HSPD1P14-201ENST00000432666 1618 ntBASIC4.24□□□□□ -1.73
NIPAL3Q6P499 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 GTF2H2B-203ENST00000508065 1432 ntBASIC4.24□□□□□ -1.73
NIPAL3Q6P499 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 OR56B2P-201ENST00000317102 954 ntBASIC4.24□□□□□ -1.73
NIPAL3Q6P499 SNORA58B-201ENST00000364259 136 ntBASIC4.24□□□□□ -1.73
NIPAL3Q6P499 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 RNA5SP372-201ENST00000390836 115 ntBASIC4.24□□□□□ -1.73
NIPAL3Q6P499 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 RPL21P108-201ENST00000413857 481 ntBASIC4.24□□□□□ -1.73
NIPAL3Q6P499 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 FO393419.3-201ENST00000428741 282 ntBASIC4.24□□□□□ -1.73
NIPAL3Q6P499 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 LYPLA1P1-201ENST00000434514 622 ntBASIC4.24□□□□□ -1.73
NIPAL3Q6P499 YWHAZP2-201ENST00000440317 728 ntBASIC4.24□□□□□ -1.73
NIPAL3Q6P499 AL691517.1-201ENST00000440833 1235 ntBASIC4.24□□□□□ -1.73
NIPAL3Q6P499 RPS15AP29-201ENST00000445539 400 ntBASIC4.24□□□□□ -1.73
NIPAL3Q6P499 TPMTP4-201ENST00000450749 678 ntBASIC4.24□□□□□ -1.73
NIPAL3Q6P499 ATP5G1P3-201ENST00000463301 410 ntBASIC4.24□□□□□ -1.73
NIPAL3Q6P499 CABYRP1-201ENST00000465493 1045 ntBASIC4.24□□□□□ -1.73
NIPAL3Q6P499 OR52A4P-202ENST00000481634 799 ntBASIC4.24□□□□□ -1.73
NIPAL3Q6P499 AC083982.1-201ENST00000485679 344 ntBASIC4.24□□□□□ -1.73
NIPAL3Q6P499 AC111193.1-201ENST00000504097 155 ntBASIC4.24□□□□□ -1.73
NIPAL3Q6P499 AC091868.1-201ENST00000508746 304 ntBASIC4.24□□□□□ -1.73
NIPAL3Q6P499 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.24□□□□□ -1.73
NIPAL3Q6P499 ZNF92P3-201ENST00000596594 954 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms