Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 CTAGE3P-201ENST00000454280 2404 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 AC097504.1-201ENST00000515103 2415 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 GRIA2-201ENST00000264426 3445 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 PPIAP26-201ENST00000377951 522 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 MT-TR-201ENST00000387439 65 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 DHFRP6-201ENST00000401776 268 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 AL136116.1-201ENST00000403591 381 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 RNU6-1148P-201ENST00000410992 104 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 BEND7P1-201ENST00000422058 457 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 DUTP6-201ENST00000425573 462 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 AC022022.1-201ENST00000430304 178 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 RPL23AP30-201ENST00000432419 501 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 AC064862.4-201ENST00000442180 334 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 AC002381.1-201ENST00000447049 280 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 HMGN3P1-201ENST00000453847 193 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 RN7SL329P-201ENST00000467740 299 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 AC078785.3-201ENST00000476607 425 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 UBA52P3-201ENST00000491303 382 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 AC034222.1-201ENST00000494052 532 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 SNX18P24-201ENST00000505249 671 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 SNX18P23-201ENST00000510867 677 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 AC027801.3-201ENST00000515049 698 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 RNU6-488P-201ENST00000515918 99 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 AC079600.1-201ENST00000550326 297 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 AC022404.1-201ENST00000555320 273 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 AC026470.2-201ENST00000561492 181 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 MIR4701-201ENST00000583094 63 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 SNRPGP17-201ENST00000603780 214 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 TCP11X1-202ENST00000622971 1372 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 AC131649.2-201ENST00000624925 4439 ntBASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
PRPF38BQ5VTL8 AC005034.3-201ENST00000604845 1747 ntBASIC7.4□□□□□ -1.23
PRPF38BQ5VTL8 ZNF806-201ENST00000438300 1774 ntBASIC7.4□□□□□ -1.23
PRPF38BQ5VTL8 DPY19L2P2-203ENST00000435536 1858 ntBASIC7.4□□□□□ -1.23
PRPF38BQ5VTL8 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
PRPF38BQ5VTL8 AC096921.2-201ENST00000561507 1916 ntBASIC7.4□□□□□ -1.23
PRPF38BQ5VTL8 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.4□□□□□ -1.23
PRPF38BQ5VTL8 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
PRPF38BQ5VTL8 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.4□□□□□ -1.23
PRPF38BQ5VTL8 NF1P2-201ENST00000556855 2505 ntBASIC7.4□□□□□ -1.23
PRPF38BQ5VTL8 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
PRPF38BQ5VTL8 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.23
PRPF38BQ5VTL8 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
PRPF38BQ5VTL8 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC7.4□□□□□ -1.23
PRPF38BQ5VTL8 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
PRPF38BQ5VTL8 AC009948.5-201ENST00000624360 4406 ntBASIC7.4□□□□□ -1.23
PRPF38BQ5VTL8 AC091544.5-201ENST00000620192 3815 ntBASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 AL022163.1-201ENST00000430261 1569 ntBASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 AL049780.3-201ENST00000624612 1583 ntBASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 RNA5SP477-201ENST00000362639 119 ntBASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 RNU6-1097P-201ENST00000363586 107 ntBASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 RNU6-853P-201ENST00000364306 107 ntBASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 RNU6-108P-201ENST00000365558 107 ntBASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 SNORD42.2-201ENST00000365570 69 ntBASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 AC017078.1-201ENST00000416146 368 ntBASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 OR1AA1P-201ENST00000419597 916 ntBASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 AC104698.1-201ENST00000435671 276 ntBASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 AL356276.2-201ENST00000435919 558 ntBASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 RPS15AP9-201ENST00000439856 381 ntBASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 EEF1B2P6-201ENST00000445713 673 ntBASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 IGKV1OR2-2-201ENST00000451163 355 ntBASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 CACYBPP2-201ENST00000453625 678 ntBASIC7.39□□□□□ -1.23
PRPF38BQ5VTL8 RNU6-329P-201ENST00000459618 107 ntBASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms