Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL592182.3-201ENST00000642132 3304 ntBASIC5.2□□□□□ -1.58
SHROOM1Q2M3G4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 AC007342.9-201ENST00000623877 1385 ntBASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 AC097374.1-203ENST00000400783 485 ntBASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 CASKP1-201ENST00000412870 582 ntBASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 AL158073.1-201ENST00000426848 1104 ntBASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 YY1P1-201ENST00000427625 668 ntBASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 AC022022.1-201ENST00000430304 178 ntBASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 AC114495.1-201ENST00000441274 436 ntBASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 CLIC4P1-201ENST00000453177 535 ntBASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 AC069304.1-201ENST00000491593 704 ntBASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 AK4P6-201ENST00000505168 528 ntBASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 AC134698.5-201ENST00000519444 336 ntBASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 AC090515.3-201ENST00000560431 315 ntBASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 AC106785.1-201ENST00000565935 262 ntBASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 RN7SL600P-201ENST00000581811 299 ntBASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 VN1R85P-201ENST00000601587 426 ntBASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 AC092653.1-201ENST00000608509 531 ntBASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 AL022322.2-201ENST00000624072 20397 ntBASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SHROOM1Q2M3G4 AC104623.2-202ENST00000623477 4002 ntBASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 SNORA57.1-201ENST00000391227 145 ntBASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 AC093719.1-202ENST00000392735 373 ntBASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 RPL32P23-201ENST00000397237 405 ntBASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 RN7SKP263-201ENST00000411194 309 ntBASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 Z74021.1-201ENST00000423610 407 ntBASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 RPS26P4-201ENST00000431743 355 ntBASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 UBE2V2P3-201ENST00000433562 437 ntBASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 PTMAP3-201ENST00000447474 330 ntBASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 AC005520.3-201ENST00000602874 370 ntBASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 BPIFA4P-203ENST00000603168 689 ntBASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 AC079791.1-201ENST00000605356 973 ntBASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 AC024941.1-201ENST00000612250 334 ntBASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 AL022393.1-201ENST00000625142 1677 ntBASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SHROOM1Q2M3G4 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
SHROOM1Q2M3G4 LARP1BP1-201ENST00000506036 1359 ntBASIC5.17□□□□□ -1.58
SHROOM1Q2M3G4 AC005261.4-201ENST00000600047 1385 ntBASIC5.17□□□□□ -1.58
SHROOM1Q2M3G4 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHROOM1Q2M3G4 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHROOM1Q2M3G4 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHROOM1Q2M3G4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
SHROOM1Q2M3G4 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.17□□□□□ -1.58
SHROOM1Q2M3G4 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SHROOM1Q2M3G4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SHROOM1Q2M3G4 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHROOM1Q2M3G4 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SHROOM1Q2M3G4 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SHROOM1Q2M3G4 MIR383-201ENST00000362257 73 ntBASIC5.17□□□□□ -1.58
SHROOM1Q2M3G4 MIR134-201ENST00000385258 73 ntBASIC5.17□□□□□ -1.58
SHROOM1Q2M3G4 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHROOM1Q2M3G4 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.17□□□□□ -1.58
SHROOM1Q2M3G4 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHROOM1Q2M3G4 AL358176.3-201ENST00000420757 454 ntBASIC5.17□□□□□ -1.58
SHROOM1Q2M3G4 MTND2P2-201ENST00000434633 945 ntBASIC5.17□□□□□ -1.58
SHROOM1Q2M3G4 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.17□□□□□ -1.58
SHROOM1Q2M3G4 OR6C72P-201ENST00000451403 892 ntBASIC5.17□□□□□ -1.58
SHROOM1Q2M3G4 SEPT7P6-201ENST00000469999 1143 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms