Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
PRKDCP78527 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.92□□□□□ -1.94
PRKDCP78527 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.92□□□□□ -1.94
PRKDCP78527 TMED11P-201ENST00000479478 690 ntBASIC2.92□□□□□ -1.94
PRKDCP78527 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.92□□□□□ -1.94
PRKDCP78527 ATE1-AS1-202ENST00000636460 506 ntBASIC2.92□□□□□ -1.94
PRKDCP78527 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PRKDCP78527 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PRKDCP78527 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PRKDCP78527 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC2.92□□□□□ -1.94
PRKDCP78527 AL360270.2-201ENST00000562952 5985 ntBASIC2.92□□□□□ -1.94
PRKDCP78527 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PRKDCP78527 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC2.91□□□□□ -1.94
PRKDCP78527 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC2.91□□□□□ -1.94
PRKDCP78527 EIF4HP2-201ENST00000424380 563 ntBASIC2.91□□□□□ -1.94
PRKDCP78527 RSL24D1P3-201ENST00000449255 495 ntBASIC2.91□□□□□ -1.94
PRKDCP78527 RPL7P22-201ENST00000466005 733 ntBASIC2.91□□□□□ -1.94
PRKDCP78527 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.91□□□□□ -1.94
PRKDCP78527 AC034105.3-201ENST00000565294 442 ntBASIC2.91□□□□□ -1.94
PRKDCP78527 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PRKDCP78527 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
PRKDCP78527 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PRKDCP78527 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC2.91□□□□□ -1.94
PRKDCP78527 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
PRKDCP78527 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC2.91□□□□□ -1.94
PRKDCP78527 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC2.91□□□□□ -1.94
PRKDCP78527 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC2.91□□□□□ -1.94
PRKDCP78527 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PRKDCP78527 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PRKDCP78527 RPL23AP37-201ENST00000479658 549 ntBASIC2.91□□□□□ -1.94
PRKDCP78527 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.91□□□□□ -1.94
PRKDCP78527 RNU4ATAC18P-201ENST00000516179 126 ntBASIC2.91□□□□□ -1.94
PRKDCP78527 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.91□□□□□ -1.94
PRKDCP78527 MIR8057-201ENST00000620957 69 ntBASIC2.91□□□□□ -1.94
PRKDCP78527 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PRKDCP78527 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC2.91□□□□□ -1.94
PRKDCP78527 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PRKDCP78527 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC2.91□□□□□ -1.94
PRKDCP78527 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PRKDCP78527 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PRKDCP78527 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PRKDCP78527 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PRKDCP78527 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC2.91□□□□□ -1.94
PRKDCP78527 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC2.91□□□□□ -1.94
PRKDCP78527 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PRKDCP78527 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC2.91□□□□□ -1.94
PRKDCP78527 BMS1P3-201ENST00000372011 932 ntBASIC2.91□□□□□ -1.94
PRKDCP78527 RPL5P2-201ENST00000429598 854 ntBASIC2.91□□□□□ -1.94
PRKDCP78527 Y_RNA.638-201ENST00000459374 113 ntBASIC2.91□□□□□ -1.94
PRKDCP78527 AC090686.1-201ENST00000481577 749 ntBASIC2.91□□□□□ -1.94
PRKDCP78527 MYL12BP2-201ENST00000503948 512 ntBASIC2.91□□□□□ -1.94
PRKDCP78527 AC010285.3-201ENST00000511668 676 ntBASIC2.91□□□□□ -1.94
PRKDCP78527 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.91□□□□□ -1.94
PRKDCP78527 RPL12P22-201ENST00000519073 490 ntBASIC2.91□□□□□ -1.94
PRKDCP78527 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC2.91□□□□□ -1.94
PRKDCP78527 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC2.91□□□□□ -1.94
PRKDCP78527 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC2.91□□□□□ -1.94
PRKDCP78527 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
PRKDCP78527 AC109446.4-201ENST00000623235 2755 ntBASIC2.91□□□□□ -1.94
PRKDCP78527 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PRKDCP78527 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.91□□□□□ -1.94
PRKDCP78527 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC2.91□□□□□ -1.94
PRKDCP78527 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
PRKDCP78527 SNORA3.3-201ENST00000408712 125 ntBASIC2.91□□□□□ -1.94
PRKDCP78527 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.91□□□□□ -1.94
PRKDCP78527 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.91□□□□□ -1.94
PRKDCP78527 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC2.91□□□□□ -1.94
PRKDCP78527 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
PRKDCP78527 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PRKDCP78527 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PRKDCP78527 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC2.9□□□□□ -1.94
PRKDCP78527 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
PRKDCP78527 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
PRKDCP78527 MIR449A-201ENST00000362113 91 ntBASIC2.9□□□□□ -1.94
PRKDCP78527 CEACAMP1-201ENST00000434624 1035 ntBASIC2.9□□□□□ -1.94
PRKDCP78527 CCRL1P1-201ENST00000449542 1053 ntBASIC2.9□□□□□ -1.94
PRKDCP78527 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.9□□□□□ -1.94
PRKDCP78527 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC2.9□□□□□ -1.94
PRKDCP78527 CYCSP40-201ENST00000575927 294 ntBASIC2.9□□□□□ -1.94
PRKDCP78527 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
PRKDCP78527 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC2.9□□□□□ -1.94
PRKDCP78527 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
PRKDCP78527 AL672167.1-205ENST00000641112 3080 ntBASIC2.9□□□□□ -1.94
PRKDCP78527 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
PRKDCP78527 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC2.9□□□□□ -1.95
PRKDCP78527 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC2.9□□□□□ -1.95
PRKDCP78527 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC2.9□□□□□ -1.95
PRKDCP78527 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
PRKDCP78527 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
PRKDCP78527 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
PRKDCP78527 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PRKDCP78527 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PRKDCP78527 AC093166.2-201ENST00000455969 1017 ntBASIC2.9□□□□□ -1.95
PRKDCP78527 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
PRKDCP78527 AC091544.4-201ENST00000555268 342 ntBASIC2.9□□□□□ -1.95
PRKDCP78527 AC243654.2-201ENST00000612843 443 ntBASIC2.9□□□□□ -1.95
PRKDCP78527 OR8G7P-201ENST00000616658 848 ntBASIC2.9□□□□□ -1.95
PRKDCP78527 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC2.9□□□□□ -1.95
PRKDCP78527 CDY3P-201ENST00000454543 1618 ntBASIC2.9□□□□□ -1.95
PRKDCP78527 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms