Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AL121657.1-201ENST00000327215 531 ntBASIC5.57□□□□□ -1.52
RIPK4P57078 RNA5SP372-201ENST00000390836 115 ntBASIC5.57□□□□□ -1.52
RIPK4P57078 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RIPK4P57078 AL035696.2-201ENST00000407941 709 ntBASIC5.57□□□□□ -1.52
RIPK4P57078 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.57□□□□□ -1.52
RIPK4P57078 RPL23AP38-201ENST00000423801 469 ntBASIC5.57□□□□□ -1.52
RIPK4P57078 GTF2IP2-201ENST00000424290 697 ntBASIC5.57□□□□□ -1.52
RIPK4P57078 COX6B1P7-201ENST00000430845 235 ntBASIC5.57□□□□□ -1.52
RIPK4P57078 BTF3P10-201ENST00000433415 495 ntBASIC5.57□□□□□ -1.52
RIPK4P57078 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.57□□□□□ -1.52
RIPK4P57078 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RIPK4P57078 AC113430.1-201ENST00000506872 718 ntBASIC5.57□□□□□ -1.52
RIPK4P57078 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.57□□□□□ -1.52
RIPK4P57078 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.57□□□□□ -1.52
RIPK4P57078 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.57□□□□□ -1.52
RIPK4P57078 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.57□□□□□ -1.52
RIPK4P57078 RN7SL600P-201ENST00000581811 299 ntBASIC5.57□□□□□ -1.52
RIPK4P57078 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.57□□□□□ -1.52
RIPK4P57078 AL008729.2-201ENST00000606393 473 ntBASIC5.57□□□□□ -1.52
RIPK4P57078 MIR6798-201ENST00000612887 67 ntBASIC5.57□□□□□ -1.52
RIPK4P57078 MIR8059-201ENST00000620427 81 ntBASIC5.57□□□□□ -1.52
RIPK4P57078 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.57□□□□□ -1.52
RIPK4P57078 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RIPK4P57078 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RIPK4P57078 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RIPK4P57078 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RIPK4P57078 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RIPK4P57078 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
RIPK4P57078 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
RIPK4P57078 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RIPK4P57078 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.56□□□□□ -1.52
RIPK4P57078 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RIPK4P57078 AP000756.2-201ENST00000624168 2567 ntBASIC5.56□□□□□ -1.52
RIPK4P57078 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RIPK4P57078 AC067945.1-201ENST00000342609 618 ntBASIC5.56□□□□□ -1.52
RIPK4P57078 RN7SKP182-201ENST00000410772 298 ntBASIC5.56□□□□□ -1.52
RIPK4P57078 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RIPK4P57078 MORF4L1P4-201ENST00000450245 976 ntBASIC5.56□□□□□ -1.52
RIPK4P57078 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.56□□□□□ -1.52
RIPK4P57078 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.56□□□□□ -1.52
RIPK4P57078 SUMO2P4-201ENST00000504193 276 ntBASIC5.56□□□□□ -1.52
RIPK4P57078 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
RIPK4P57078 AC099522.1-202ENST00000514718 367 ntBASIC5.56□□□□□ -1.52
RIPK4P57078 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.56□□□□□ -1.52
RIPK4P57078 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.56□□□□□ -1.52
RIPK4P57078 AC027176.2-201ENST00000559166 746 ntBASIC5.56□□□□□ -1.52
RIPK4P57078 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.56□□□□□ -1.52
RIPK4P57078 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.56□□□□□ -1.52
RIPK4P57078 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.56□□□□□ -1.52
RIPK4P57078 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RIPK4P57078 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RIPK4P57078 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
RIPK4P57078 AL133243.3-201ENST00000617415 3004 ntBASIC5.56□□□□□ -1.52
RIPK4P57078 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.56□□□□□ -1.52
RIPK4P57078 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RIPK4P57078 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.56□□□□□ -1.52
RIPK4P57078 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.56□□□□□ -1.52
RIPK4P57078 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RIPK4P57078 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
RIPK4P57078 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RIPK4P57078 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RIPK4P57078 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RIPK4P57078 NOL8P1-201ENST00000508336 3529 ntBASIC5.55□□□□□ -1.52
RIPK4P57078 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.55□□□□□ -1.52
RIPK4P57078 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RIPK4P57078 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.55□□□□□ -1.52
RIPK4P57078 HDGFP1-201ENST00000405943 252 ntBASIC5.55□□□□□ -1.52
RIPK4P57078 VN1R8P-201ENST00000407739 893 ntBASIC5.55□□□□□ -1.52
RIPK4P57078 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.55□□□□□ -1.52
RIPK4P57078 AL161631.1-201ENST00000417933 486 ntBASIC5.55□□□□□ -1.52
RIPK4P57078 RPS12P5-201ENST00000423449 371 ntBASIC5.55□□□□□ -1.52
RIPK4P57078 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.55□□□□□ -1.52
RIPK4P57078 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.55□□□□□ -1.52
RIPK4P57078 AC103987.1-201ENST00000473394 348 ntBASIC5.55□□□□□ -1.52
RIPK4P57078 RPS29P19-201ENST00000479709 171 ntBASIC5.55□□□□□ -1.52
RIPK4P57078 PPM1AP1-201ENST00000502740 1135 ntBASIC5.55□□□□□ -1.52
RIPK4P57078 AC108145.1-201ENST00000503770 153 ntBASIC5.55□□□□□ -1.52
RIPK4P57078 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
RIPK4P57078 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.55□□□□□ -1.52
RIPK4P57078 PRELID3BP5-201ENST00000508612 460 ntBASIC5.55□□□□□ -1.52
RIPK4P57078 NPM1P6-201ENST00000521088 871 ntBASIC5.55□□□□□ -1.52
RIPK4P57078 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.55□□□□□ -1.52
RIPK4P57078 AC100770.1-201ENST00000532310 322 ntBASIC5.55□□□□□ -1.52
RIPK4P57078 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.55□□□□□ -1.52
RIPK4P57078 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.55□□□□□ -1.52
RIPK4P57078 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.55□□□□□ -1.52
RIPK4P57078 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.55□□□□□ -1.52
RIPK4P57078 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RIPK4P57078 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.55□□□□□ -1.52
RIPK4P57078 AC006116.5-201ENST00000591936 559 ntBASIC5.55□□□□□ -1.52
RIPK4P57078 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.55□□□□□ -1.52
RIPK4P57078 AC009237.17-201ENST00000618111 748 ntBASIC5.55□□□□□ -1.52
RIPK4P57078 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.55□□□□□ -1.52
RIPK4P57078 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RIPK4P57078 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RIPK4P57078 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.54□□□□□ -1.52
RIPK4P57078 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RIPK4P57078 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.54□□□□□ -1.52
RIPK4P57078 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RIPK4P57078 RNU1-15P-201ENST00000353977 144 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms