Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC106883.1-201ENST00000418805 562 ntBASIC4.48□□□□□ -1.69
CDH11P55287 EIF4HP2-201ENST00000424380 563 ntBASIC4.48□□□□□ -1.69
CDH11P55287 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDH11P55287 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.48□□□□□ -1.69
CDH11P55287 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.48□□□□□ -1.69
CDH11P55287 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.48□□□□□ -1.69
CDH11P55287 BX323845.1-201ENST00000432417 179 ntBASIC4.48□□□□□ -1.69
CDH11P55287 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.48□□□□□ -1.69
CDH11P55287 PSMD10P3-201ENST00000437000 448 ntBASIC4.48□□□□□ -1.69
CDH11P55287 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.48□□□□□ -1.69
CDH11P55287 ARF4P4-201ENST00000439608 520 ntBASIC4.48□□□□□ -1.69
CDH11P55287 RPS29P9-201ENST00000440360 171 ntBASIC4.48□□□□□ -1.69
CDH11P55287 RRM2P4-201ENST00000441721 562 ntBASIC4.48□□□□□ -1.69
CDH11P55287 HMGB1P4-201ENST00000455362 567 ntBASIC4.48□□□□□ -1.69
CDH11P55287 AL445433.1-201ENST00000457507 257 ntBASIC4.48□□□□□ -1.69
CDH11P55287 RPS17P2-201ENST00000461663 408 ntBASIC4.48□□□□□ -1.69
CDH11P55287 AC108751.2-201ENST00000469993 231 ntBASIC4.48□□□□□ -1.69
CDH11P55287 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDH11P55287 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.48□□□□□ -1.69
CDH11P55287 AC118942.1-201ENST00000529674 1035 ntBASIC4.48□□□□□ -1.69
CDH11P55287 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.48□□□□□ -1.69
CDH11P55287 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.48□□□□□ -1.69
CDH11P55287 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.48□□□□□ -1.69
CDH11P55287 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.48□□□□□ -1.69
CDH11P55287 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CDH11P55287 AL158211.1-201ENST00000566763 763 ntBASIC4.48□□□□□ -1.69
CDH11P55287 MIR4700-201ENST00000578311 74 ntBASIC4.48□□□□□ -1.69
CDH11P55287 RN7SL622P-201ENST00000585292 275 ntBASIC4.48□□□□□ -1.69
CDH11P55287 AL121652.1-201ENST00000608851 448 ntBASIC4.48□□□□□ -1.69
CDH11P55287 AC093799.2-201ENST00000610062 578 ntBASIC4.48□□□□□ -1.69
CDH11P55287 AC010435.1-201ENST00000623353 1177 ntBASIC4.48□□□□□ -1.69
CDH11P55287 AC011815.3-201ENST00000624194 473 ntBASIC4.48□□□□□ -1.69
CDH11P55287 AC024023.1-201ENST00000624530 922 ntBASIC4.48□□□□□ -1.69
CDH11P55287 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.48□□□□□ -1.69
CDH11P55287 AL359922.3-201ENST00000624779 1670 ntBASIC4.48□□□□□ -1.69
CDH11P55287 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDH11P55287 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH11P55287 AL133268.1-201ENST00000405676 1401 ntBASIC4.47□□□□□ -1.69
CDH11P55287 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDH11P55287 VPS35P1-201ENST00000563400 1518 ntBASIC4.47□□□□□ -1.69
CDH11P55287 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH11P55287 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
CDH11P55287 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH11P55287 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
CDH11P55287 AC008549.2-201ENST00000333482 706 ntBASIC4.47□□□□□ -1.69
CDH11P55287 RNA5SP455-201ENST00000365190 119 ntBASIC4.47□□□□□ -1.69
CDH11P55287 SNORA70.10-201ENST00000384515 134 ntBASIC4.47□□□□□ -1.69
CDH11P55287 AL109941.1-201ENST00000401925 229 ntBASIC4.47□□□□□ -1.69
CDH11P55287 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.47□□□□□ -1.69
CDH11P55287 HMGB3P31-201ENST00000413333 595 ntBASIC4.47□□□□□ -1.69
CDH11P55287 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH11P55287 OR6K4P-201ENST00000423179 955 ntBASIC4.47□□□□□ -1.69
CDH11P55287 AC073310.1-201ENST00000423226 1033 ntBASIC4.47□□□□□ -1.69
CDH11P55287 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH11P55287 DPY19L1P2-201ENST00000426647 915 ntBASIC4.47□□□□□ -1.69
CDH11P55287 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH11P55287 DEFB130D-201ENST00000426866 237 ntBASIC4.47□□□□□ -1.69
CDH11P55287 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.47□□□□□ -1.69
CDH11P55287 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH11P55287 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH11P55287 CACYBPP1-201ENST00000438592 684 ntBASIC4.47□□□□□ -1.69
CDH11P55287 AC000041.1-201ENST00000439655 175 ntBASIC4.47□□□□□ -1.69
CDH11P55287 MRPL48P1-201ENST00000445390 636 ntBASIC4.47□□□□□ -1.69
CDH11P55287 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.47□□□□□ -1.69
CDH11P55287 RPS6P2-201ENST00000454208 705 ntBASIC4.47□□□□□ -1.69
CDH11P55287 snoU109.3-201ENST00000459477 145 ntBASIC4.47□□□□□ -1.69
CDH11P55287 AC104164.3-201ENST00000467363 1258 ntBASIC4.47□□□□□ -1.69
CDH11P55287 AC097484.1-201ENST00000471148 389 ntBASIC4.47□□□□□ -1.69
CDH11P55287 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.47□□□□□ -1.69
CDH11P55287 AC008427.1-201ENST00000503102 655 ntBASIC4.47□□□□□ -1.69
CDH11P55287 SUMO2P5-201ENST00000506790 245 ntBASIC4.47□□□□□ -1.69
CDH11P55287 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.47□□□□□ -1.69
CDH11P55287 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.47□□□□□ -1.69
CDH11P55287 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.47□□□□□ -1.69
CDH11P55287 AC012339.2-201ENST00000523996 453 ntBASIC4.47□□□□□ -1.69
CDH11P55287 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.47□□□□□ -1.69
CDH11P55287 SS18L2P2-201ENST00000583960 235 ntBASIC4.47□□□□□ -1.69
CDH11P55287 AC104687.2-201ENST00000604442 342 ntBASIC4.47□□□□□ -1.69
CDH11P55287 AC018618.2-201ENST00000604770 446 ntBASIC4.47□□□□□ -1.69
CDH11P55287 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.47□□□□□ -1.69
CDH11P55287 AC011472.4-201ENST00000615848 491 ntBASIC4.47□□□□□ -1.69
CDH11P55287 AC100827.5-201ENST00000615883 426 ntBASIC4.47□□□□□ -1.69
CDH11P55287 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.47□□□□□ -1.69
CDH11P55287 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.47□□□□□ -1.69
CDH11P55287 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDH11P55287 RLIMP2-201ENST00000427891 1563 ntBASIC4.47□□□□□ -1.69
CDH11P55287 CCT8P1-201ENST00000413611 1657 ntBASIC4.47□□□□□ -1.69
CDH11P55287 Z95327.2-201ENST00000414579 1873 ntBASIC4.47□□□□□ -1.69
CDH11P55287 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
CDH11P55287 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH11P55287 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.47□□□□□ -1.69
CDH11P55287 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.47□□□□□ -1.69
CDH11P55287 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CDH11P55287 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CDH11P55287 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDH11P55287 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDH11P55287 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
CDH11P55287 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CDH11P55287 NXF4-202ENST00000416098 1465 ntBASIC4.46□□□□□ -1.7
CDH11P55287 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms