Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC087468.1-201ENST00000604365 630 ntBASIC4.98□□□□□ -1.61
HMGCS2P54868 Z98200.1-201ENST00000607298 470 ntBASIC4.98□□□□□ -1.61
HMGCS2P54868 AP002360.3-201ENST00000607673 710 ntBASIC4.98□□□□□ -1.61
HMGCS2P54868 AC010608.2-201ENST00000624830 470 ntBASIC4.98□□□□□ -1.61
HMGCS2P54868 CDRT1-208ENST00000630868 794 ntBASIC4.98□□□□□ -1.61
HMGCS2P54868 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HMGCS2P54868 AC005261.6-201ENST00000623072 1387 ntBASIC4.98□□□□□ -1.61
HMGCS2P54868 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.98□□□□□ -1.61
HMGCS2P54868 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HMGCS2P54868 AC068870.3-201ENST00000625077 2536 ntBASIC4.98□□□□□ -1.61
HMGCS2P54868 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HMGCS2P54868 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HMGCS2P54868 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.98□□□□□ -1.61
HMGCS2P54868 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HMGCS2P54868 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.98□□□□□ -1.61
HMGCS2P54868 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
HMGCS2P54868 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
HMGCS2P54868 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HMGCS2P54868 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGCS2P54868 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HMGCS2P54868 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HMGCS2P54868 AL672167.1-204ENST00000641875 3017 ntBASIC4.97□□□□□ -1.61
HMGCS2P54868 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.97□□□□□ -1.61
HMGCS2P54868 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGCS2P54868 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGCS2P54868 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGCS2P54868 MTND5P23-201ENST00000430812 1655 ntBASIC4.97□□□□□ -1.61
HMGCS2P54868 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.97□□□□□ -1.61
HMGCS2P54868 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.97□□□□□ -1.61
HMGCS2P54868 PTP4A1P1-201ENST00000420539 515 ntBASIC4.97□□□□□ -1.61
HMGCS2P54868 RPL23AP25-201ENST00000430973 463 ntBASIC4.97□□□□□ -1.61
HMGCS2P54868 RPS29P7-201ENST00000439662 171 ntBASIC4.97□□□□□ -1.61
HMGCS2P54868 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HMGCS2P54868 NPM1P28-201ENST00000492269 840 ntBASIC4.97□□□□□ -1.61
HMGCS2P54868 TPT1P3-201ENST00000492841 512 ntBASIC4.97□□□□□ -1.61
HMGCS2P54868 RNA5SP73-201ENST00000516744 108 ntBASIC4.97□□□□□ -1.61
HMGCS2P54868 MTND2P17-201ENST00000550281 688 ntBASIC4.97□□□□□ -1.61
HMGCS2P54868 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.97□□□□□ -1.61
HMGCS2P54868 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.97□□□□□ -1.61
HMGCS2P54868 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HMGCS2P54868 AC053481.4-201ENST00000583164 216 ntBASIC4.97□□□□□ -1.61
HMGCS2P54868 RPL7P50-201ENST00000600588 727 ntBASIC4.97□□□□□ -1.61
HMGCS2P54868 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.97□□□□□ -1.61
HMGCS2P54868 AC007546.2-201ENST00000623996 360 ntBASIC4.97□□□□□ -1.61
HMGCS2P54868 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.97□□□□□ -1.61
HMGCS2P54868 AL672167.1-203ENST00000641299 2975 ntBASIC4.97□□□□□ -1.61
HMGCS2P54868 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HMGCS2P54868 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
HMGCS2P54868 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
HMGCS2P54868 AC022893.2-201ENST00000564832 3296 ntBASIC4.96□□□□□ -1.61
HMGCS2P54868 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
HMGCS2P54868 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HMGCS2P54868 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HMGCS2P54868 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HMGCS2P54868 SNORA62.3-201ENST00000365110 153 ntBASIC4.96□□□□□ -1.62
HMGCS2P54868 MIR670-201ENST00000390142 98 ntBASIC4.96□□□□□ -1.62
HMGCS2P54868 RNU11-4P-201ENST00000391149 133 ntBASIC4.96□□□□□ -1.62
HMGCS2P54868 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.96□□□□□ -1.62
HMGCS2P54868 AL358178.1-201ENST00000407698 397 ntBASIC4.96□□□□□ -1.62
HMGCS2P54868 BX119904.3-201ENST00000428194 957 ntBASIC4.96□□□□□ -1.62
HMGCS2P54868 CDY14P-201ENST00000431260 1014 ntBASIC4.96□□□□□ -1.62
HMGCS2P54868 RPS26P4-201ENST00000431743 355 ntBASIC4.96□□□□□ -1.62
HMGCS2P54868 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGCS2P54868 CEACAMP1-201ENST00000434624 1035 ntBASIC4.96□□□□□ -1.62
HMGCS2P54868 UBE2V2P1-201ENST00000434717 398 ntBASIC4.96□□□□□ -1.62
HMGCS2P54868 CDY12P-201ENST00000440679 1015 ntBASIC4.96□□□□□ -1.62
HMGCS2P54868 CDY13P-201ENST00000445813 1015 ntBASIC4.96□□□□□ -1.62
HMGCS2P54868 CDY23P-201ENST00000451661 1014 ntBASIC4.96□□□□□ -1.62
HMGCS2P54868 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.96□□□□□ -1.62
HMGCS2P54868 RPL23AP81-201ENST00000455252 467 ntBASIC4.96□□□□□ -1.62
HMGCS2P54868 AC091959.2-201ENST00000477363 321 ntBASIC4.96□□□□□ -1.62
HMGCS2P54868 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGCS2P54868 FTH1P21-201ENST00000512179 511 ntBASIC4.96□□□□□ -1.62
HMGCS2P54868 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC4.96□□□□□ -1.62
HMGCS2P54868 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.96□□□□□ -1.62
HMGCS2P54868 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.96□□□□□ -1.62
HMGCS2P54868 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGCS2P54868 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGCS2P54868 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGCS2P54868 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.96□□□□□ -1.62
HMGCS2P54868 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HMGCS2P54868 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
HMGCS2P54868 AC125336.1-201ENST00000508893 2827 ntBASIC4.96□□□□□ -1.62
HMGCS2P54868 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCS2P54868 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCS2P54868 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCS2P54868 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HMGCS2P54868 RNA5SP307-201ENST00000362863 116 ntBASIC4.95□□□□□ -1.62
HMGCS2P54868 RNU1-20P-201ENST00000363314 162 ntBASIC4.95□□□□□ -1.62
HMGCS2P54868 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCS2P54868 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HMGCS2P54868 ENSAP1-201ENST00000392855 326 ntBASIC4.95□□□□□ -1.62
HMGCS2P54868 SNORA74C-2-201ENST00000411179 201 ntBASIC4.95□□□□□ -1.62
HMGCS2P54868 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.95□□□□□ -1.62
HMGCS2P54868 OR2AH1P-201ENST00000425717 928 ntBASIC4.95□□□□□ -1.62
HMGCS2P54868 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.95□□□□□ -1.62
HMGCS2P54868 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.95□□□□□ -1.62
HMGCS2P54868 ARAFP2-201ENST00000440565 559 ntBASIC4.95□□□□□ -1.62
HMGCS2P54868 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.95□□□□□ -1.62
HMGCS2P54868 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms