Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.01□□□□□ -1.45
EPHB3P54753 ZNF680P1-201ENST00000436625 1469 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.01□□□□□ -1.45
EPHB3P54753 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
EPHB3P54753 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
EPHB3P54753 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
EPHB3P54753 HSPD1P7-201ENST00000447985 1686 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
EPHB3P54753 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
EPHB3P54753 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
EPHB3P54753 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6□□□□□ -1.45
EPHB3P54753 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
EPHB3P54753 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
EPHB3P54753 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
EPHB3P54753 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6□□□□□ -1.45
EPHB3P54753 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6□□□□□ -1.45
EPHB3P54753 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6□□□□□ -1.45
EPHB3P54753 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
EPHB3P54753 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
EPHB3P54753 SNORD1C-201ENST00000363315 78 ntBASIC6□□□□□ -1.45
EPHB3P54753 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6□□□□□ -1.45
EPHB3P54753 AL121835.1-201ENST00000404250 354 ntBASIC6□□□□□ -1.45
EPHB3P54753 SNORA11B-201ENST00000408175 129 ntBASIC6□□□□□ -1.45
EPHB3P54753 MIR1277-201ENST00000408536 78 ntBASIC6□□□□□ -1.45
EPHB3P54753 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC6□□□□□ -1.45
EPHB3P54753 RPL21P108-201ENST00000413857 481 ntBASIC6□□□□□ -1.45
EPHB3P54753 TAF13P2-201ENST00000416876 286 ntBASIC6□□□□□ -1.45
EPHB3P54753 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6□□□□□ -1.45
EPHB3P54753 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6□□□□□ -1.45
EPHB3P54753 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6□□□□□ -1.45
EPHB3P54753 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC6□□□□□ -1.45
EPHB3P54753 TRIM60P3Y-201ENST00000432201 673 ntBASIC6□□□□□ -1.45
EPHB3P54753 LYPLA1P1-201ENST00000434514 622 ntBASIC6□□□□□ -1.45
EPHB3P54753 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6□□□□□ -1.45
EPHB3P54753 RPL23AP76-201ENST00000441860 458 ntBASIC6□□□□□ -1.45
EPHB3P54753 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6□□□□□ -1.45
EPHB3P54753 RPL36AP33-201ENST00000450395 310 ntBASIC6□□□□□ -1.45
EPHB3P54753 AC004129.2-201ENST00000457229 287 ntBASIC6□□□□□ -1.45
EPHB3P54753 AL121769.1-201ENST00000469473 401 ntBASIC6□□□□□ -1.45
EPHB3P54753 AC128716.1-201ENST00000475129 166 ntBASIC6□□□□□ -1.45
EPHB3P54753 AC073610.1-201ENST00000489971 396 ntBASIC6□□□□□ -1.45
EPHB3P54753 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6□□□□□ -1.45
EPHB3P54753 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6□□□□□ -1.45
EPHB3P54753 WBP1LP4-201ENST00000505043 344 ntBASIC6□□□□□ -1.45
EPHB3P54753 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6□□□□□ -1.45
EPHB3P54753 HMGB3P13-201ENST00000511263 607 ntBASIC6□□□□□ -1.45
EPHB3P54753 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC6□□□□□ -1.45
EPHB3P54753 AC010587.2-201ENST00000511727 448 ntBASIC6□□□□□ -1.45
EPHB3P54753 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC6□□□□□ -1.45
EPHB3P54753 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC6□□□□□ -1.45
EPHB3P54753 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6□□□□□ -1.45
EPHB3P54753 NTS-203ENST00000551529 801 ntTSL 3 BASIC6□□□□□ -1.45
EPHB3P54753 MIR5708-201ENST00000579723 85 ntBASIC6□□□□□ -1.45
EPHB3P54753 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6□□□□□ -1.45
EPHB3P54753 AL390816.3-201ENST00000604527 1066 ntBASIC6□□□□□ -1.45
EPHB3P54753 AC112220.3-201ENST00000605502 502 ntBASIC6□□□□□ -1.45
EPHB3P54753 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6□□□□□ -1.45
EPHB3P54753 SDR42E1P1-201ENST00000611327 477 ntBASIC6□□□□□ -1.45
EPHB3P54753 OR5H6-203ENST00000642105 978 ntBASIC6□□□□□ -1.45
EPHB3P54753 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6□□□□□ -1.45
EPHB3P54753 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
EPHB3P54753 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6□□□□□ -1.45
EPHB3P54753 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6□□□□□ -1.45
EPHB3P54753 UGT2B24P-201ENST00000514441 1597 ntBASIC6□□□□□ -1.45
EPHB3P54753 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
EPHB3P54753 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6□□□□□ -1.45
EPHB3P54753 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6□□□□□ -1.45
EPHB3P54753 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6□□□□□ -1.45
EPHB3P54753 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
EPHB3P54753 MTCO1P18-201ENST00000455518 1419 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.99□□□□□ -1.45
EPHB3P54753 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
EPHB3P54753 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.99□□□□□ -1.45
EPHB3P54753 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.99□□□□□ -1.45
EPHB3P54753 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
EPHB3P54753 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.99□□□□□ -1.45
EPHB3P54753 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.99□□□□□ -1.45
EPHB3P54753 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
EPHB3P54753 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
EPHB3P54753 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
EPHB3P54753 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
EPHB3P54753 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
EPHB3P54753 AC005539.1-201ENST00000443768 1479 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.99□□□□□ -1.45
EPHB3P54753 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
EPHB3P54753 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
EPHB3P54753 RNA5SP319-201ENST00000362768 119 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 Y_RNA.554-201ENST00000384672 102 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 MIR181A1-201ENST00000385026 110 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
EPHB3P54753 RPL17P50-201ENST00000396131 546 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.99□□□□□ -1.45
EPHB3P54753 AL139098.1-201ENST00000407291 389 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 RPS7P13-201ENST00000413955 498 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 UBTFL3-201ENST00000418934 1024 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 USP9YP20-201ENST00000419224 558 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC5.99□□□□□ -1.45
EPHB3P54753 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.99□□□□□ -1.45
EPHB3P54753 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.99□□□□□ -1.45
EPHB3P54753 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms