Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.38□□□□□ -1.55
COPB1P53618 RPA2P2-201ENST00000419698 796 ntBASIC5.38□□□□□ -1.55
COPB1P53618 AC006065.1-201ENST00000422539 802 ntBASIC5.38□□□□□ -1.55
COPB1P53618 FABP7P2-201ENST00000429946 379 ntBASIC5.38□□□□□ -1.55
COPB1P53618 AC005189.1-201ENST00000431286 310 ntBASIC5.38□□□□□ -1.55
COPB1P53618 NDUFA5P10-201ENST00000432147 357 ntBASIC5.38□□□□□ -1.55
COPB1P53618 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.38□□□□□ -1.55
COPB1P53618 AC092647.3-201ENST00000443044 633 ntBASIC5.38□□□□□ -1.55
COPB1P53618 OR7E125P-201ENST00000443450 846 ntBASIC5.38□□□□□ -1.55
COPB1P53618 SETD6P1-201ENST00000444575 317 ntBASIC5.38□□□□□ -1.55
COPB1P53618 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.38□□□□□ -1.55
COPB1P53618 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
COPB1P53618 AC000111.2-201ENST00000448200 210 ntBASIC5.38□□□□□ -1.55
COPB1P53618 AL445433.1-201ENST00000457507 257 ntBASIC5.38□□□□□ -1.55
COPB1P53618 CYCSP34-201ENST00000458172 304 ntBASIC5.38□□□□□ -1.55
COPB1P53618 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COPB1P53618 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COPB1P53618 AC073358.1-201ENST00000505671 684 ntBASIC5.38□□□□□ -1.55
COPB1P53618 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.38□□□□□ -1.55
COPB1P53618 RN7SKP46-201ENST00000515942 234 ntBASIC5.38□□□□□ -1.55
COPB1P53618 RNA5SP43-201ENST00000516559 110 ntBASIC5.38□□□□□ -1.55
COPB1P53618 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.38□□□□□ -1.55
COPB1P53618 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.38□□□□□ -1.55
COPB1P53618 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.38□□□□□ -1.55
COPB1P53618 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.38□□□□□ -1.55
COPB1P53618 AP001804.2-201ENST00000533932 910 ntBASIC5.38□□□□□ -1.55
COPB1P53618 NMNAT1P1-201ENST00000554095 876 ntBASIC5.38□□□□□ -1.55
COPB1P53618 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.38□□□□□ -1.55
COPB1P53618 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.38□□□□□ -1.55
COPB1P53618 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.38□□□□□ -1.55
COPB1P53618 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.38□□□□□ -1.55
COPB1P53618 AC087477.6-201ENST00000559595 843 ntBASIC5.38□□□□□ -1.55
COPB1P53618 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.38□□□□□ -1.55
COPB1P53618 MIR4789-201ENST00000577469 82 ntBASIC5.38□□□□□ -1.55
COPB1P53618 AC008088.1-201ENST00000580993 280 ntBASIC5.38□□□□□ -1.55
COPB1P53618 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.38□□□□□ -1.55
COPB1P53618 AC068020.1-201ENST00000594215 661 ntBASIC5.38□□□□□ -1.55
COPB1P53618 AC130352.1-201ENST00000602979 661 ntBASIC5.38□□□□□ -1.55
COPB1P53618 AC087783.2-201ENST00000605070 562 ntBASIC5.38□□□□□ -1.55
COPB1P53618 IMMP1LP1-201ENST00000605170 488 ntBASIC5.38□□□□□ -1.55
COPB1P53618 AL512329.2-201ENST00000607350 548 ntBASIC5.38□□□□□ -1.55
COPB1P53618 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.38□□□□□ -1.55
COPB1P53618 AC004948.1-201ENST00000609858 672 ntBASIC5.38□□□□□ -1.55
COPB1P53618 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.38□□□□□ -1.55
COPB1P53618 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
COPB1P53618 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.38□□□□□ -1.55
COPB1P53618 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.38□□□□□ -1.55
COPB1P53618 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COPB1P53618 AL133268.1-201ENST00000405676 1401 ntBASIC5.38□□□□□ -1.55
COPB1P53618 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
COPB1P53618 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
COPB1P53618 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
COPB1P53618 AL672167.1-205ENST00000641112 3080 ntBASIC5.37□□□□□ -1.55
COPB1P53618 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.37□□□□□ -1.55
COPB1P53618 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COPB1P53618 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
COPB1P53618 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
COPB1P53618 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.37□□□□□ -1.55
COPB1P53618 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
COPB1P53618 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COPB1P53618 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COPB1P53618 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COPB1P53618 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COPB1P53618 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.37□□□□□ -1.55
COPB1P53618 RNU6-249P-201ENST00000363016 102 ntBASIC5.37□□□□□ -1.55
COPB1P53618 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
COPB1P53618 AL357515.1-201ENST00000402967 542 ntBASIC5.37□□□□□ -1.55
COPB1P53618 U3.35-201ENST00000408405 208 ntBASIC5.37□□□□□ -1.55
COPB1P53618 RNU4-22P-201ENST00000411058 166 ntBASIC5.37□□□□□ -1.55
COPB1P53618 E2F6P2-201ENST00000420708 748 ntBASIC5.37□□□□□ -1.55
COPB1P53618 DDX39BP1-205ENST00000422507 192 ntBASIC5.37□□□□□ -1.55
COPB1P53618 NPM1P22-201ENST00000427761 952 ntBASIC5.37□□□□□ -1.55
COPB1P53618 RPS6P15-201ENST00000431996 751 ntBASIC5.37□□□□□ -1.55
COPB1P53618 GTF2IP3-201ENST00000433887 494 ntBASIC5.37□□□□□ -1.55
COPB1P53618 NMNAT1P2-201ENST00000435192 860 ntBASIC5.37□□□□□ -1.55
COPB1P53618 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.37□□□□□ -1.55
COPB1P53618 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.37□□□□□ -1.55
COPB1P53618 Z99714.1-201ENST00000450463 807 ntBASIC5.37□□□□□ -1.55
COPB1P53618 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.37□□□□□ -1.55
COPB1P53618 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.37□□□□□ -1.55
COPB1P53618 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.37□□□□□ -1.55
COPB1P53618 AC108751.2-201ENST00000469993 231 ntBASIC5.37□□□□□ -1.55
COPB1P53618 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.37□□□□□ -1.55
COPB1P53618 AC004263.1-201ENST00000479327 332 ntBASIC5.37□□□□□ -1.55
COPB1P53618 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.37□□□□□ -1.55
COPB1P53618 AC091544.1-201ENST00000484702 348 ntBASIC5.37□□□□□ -1.55
COPB1P53618 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
COPB1P53618 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COPB1P53618 AC025459.1-201ENST00000504072 156 ntBASIC5.37□□□□□ -1.55
COPB1P53618 HIGD1AP14-201ENST00000507617 282 ntBASIC5.37□□□□□ -1.55
COPB1P53618 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.37□□□□□ -1.55
COPB1P53618 RN7SKP260-201ENST00000516907 149 ntBASIC5.37□□□□□ -1.55
COPB1P53618 MTCYBP19-201ENST00000517463 1124 ntBASIC5.37□□□□□ -1.55
COPB1P53618 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.37□□□□□ -1.55
COPB1P53618 OR11J2P-201ENST00000555298 907 ntBASIC5.37□□□□□ -1.55
COPB1P53618 AC025588.2-201ENST00000604851 466 ntBASIC5.37□□□□□ -1.55
COPB1P53618 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.37□□□□□ -1.55
COPB1P53618 AC126915.2-201ENST00000610957 190 ntBASIC5.37□□□□□ -1.55
COPB1P53618 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.37□□□□□ -1.55
COPB1P53618 AL627230.1-201ENST00000613077 211 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms