Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RN7SL570P-201ENST00000484405 292 ntBASIC6.19□□□□□ -1.42
MRE11P49959 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC6.19□□□□□ -1.42
MRE11P49959 MTCYBP16-201ENST00000509187 1129 ntBASIC6.19□□□□□ -1.42
MRE11P49959 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.19□□□□□ -1.42
MRE11P49959 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.19□□□□□ -1.42
MRE11P49959 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC6.19□□□□□ -1.42
MRE11P49959 AC087897.1-201ENST00000550134 156 ntBASIC6.19□□□□□ -1.42
MRE11P49959 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC6.19□□□□□ -1.42
MRE11P49959 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.19□□□□□ -1.42
MRE11P49959 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.19□□□□□ -1.42
MRE11P49959 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.19□□□□□ -1.42
MRE11P49959 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.19□□□□□ -1.42
MRE11P49959 AL020997.2-201ENST00000602607 184 ntBASIC6.19□□□□□ -1.42
MRE11P49959 AC087763.1-201ENST00000603391 286 ntBASIC6.19□□□□□ -1.42
MRE11P49959 AC067838.1-201ENST00000606064 577 ntBASIC6.19□□□□□ -1.42
MRE11P49959 AL583856.2-201ENST00000606298 543 ntBASIC6.19□□□□□ -1.42
MRE11P49959 AC010245.2-201ENST00000606908 1167 ntBASIC6.19□□□□□ -1.42
MRE11P49959 AC244107.2-201ENST00000611773 76 ntBASIC6.19□□□□□ -1.42
MRE11P49959 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
MRE11P49959 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
MRE11P49959 AL603755.1-201ENST00000619504 163 ntBASIC6.19□□□□□ -1.42
MRE11P49959 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC6.19□□□□□ -1.42
MRE11P49959 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.19□□□□□ -1.42
MRE11P49959 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC6.19□□□□□ -1.42
MRE11P49959 AC007671.2-201ENST00000637344 619 ntBASIC6.19□□□□□ -1.42
MRE11P49959 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.19□□□□□ -1.42
MRE11P49959 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
MRE11P49959 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.19□□□□□ -1.42
MRE11P49959 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.19□□□□□ -1.42
MRE11P49959 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
MRE11P49959 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.19□□□□□ -1.42
MRE11P49959 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.19□□□□□ -1.42
MRE11P49959 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC6.18□□□□□ -1.42
MRE11P49959 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MRE11P49959 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MRE11P49959 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.18□□□□□ -1.42
MRE11P49959 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MRE11P49959 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.18□□□□□ -1.42
MRE11P49959 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
MRE11P49959 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MRE11P49959 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC6.18□□□□□ -1.42
MRE11P49959 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MRE11P49959 RNU6-1251P-201ENST00000364502 107 ntBASIC6.18□□□□□ -1.42
MRE11P49959 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MRE11P49959 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MRE11P49959 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MRE11P49959 RNU6-729P-201ENST00000384399 107 ntBASIC6.18□□□□□ -1.42
MRE11P49959 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
MRE11P49959 GSTA12P-201ENST00000402398 508 ntBASIC6.18□□□□□ -1.42
MRE11P49959 RPL7P27-201ENST00000403775 720 ntBASIC6.18□□□□□ -1.42
MRE11P49959 AL009179.1-201ENST00000406085 265 ntBASIC6.18□□□□□ -1.42
MRE11P49959 AL354890.1-201ENST00000413730 346 ntBASIC6.18□□□□□ -1.42
MRE11P49959 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC6.18□□□□□ -1.42
MRE11P49959 MTND4P3-201ENST00000417829 541 ntBASIC6.18□□□□□ -1.42
MRE11P49959 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC6.18□□□□□ -1.42
MRE11P49959 Z84478.1-201ENST00000438230 1219 ntBASIC6.18□□□□□ -1.42
MRE11P49959 MTND4P6-201ENST00000438297 472 ntBASIC6.18□□□□□ -1.42
MRE11P49959 EEF1A1P39-201ENST00000440791 250 ntBASIC6.18□□□□□ -1.42
MRE11P49959 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC6.18□□□□□ -1.42
MRE11P49959 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC6.18□□□□□ -1.42
MRE11P49959 EXTL2P1-201ENST00000446218 416 ntBASIC6.18□□□□□ -1.42
MRE11P49959 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
MRE11P49959 TPT1P12-201ENST00000448968 492 ntBASIC6.18□□□□□ -1.42
MRE11P49959 AURKAPS1-201ENST00000451805 1212 ntBASIC6.18□□□□□ -1.42
MRE11P49959 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
MRE11P49959 MTND4LP3-201ENST00000468320 276 ntBASIC6.18□□□□□ -1.42
MRE11P49959 RN7SL738P-201ENST00000470264 297 ntBASIC6.18□□□□□ -1.42
MRE11P49959 AC079203.1-201ENST00000487972 404 ntBASIC6.18□□□□□ -1.42
MRE11P49959 RPS27AP16-201ENST00000492222 470 ntBASIC6.18□□□□□ -1.42
MRE11P49959 RN7SL447P-201ENST00000494711 245 ntBASIC6.18□□□□□ -1.42
MRE11P49959 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.18□□□□□ -1.42
MRE11P49959 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MRE11P49959 AC024558.1-201ENST00000505008 528 ntBASIC6.18□□□□□ -1.42
MRE11P49959 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.18□□□□□ -1.42
MRE11P49959 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.18□□□□□ -1.42
MRE11P49959 AC117532.1-201ENST00000514638 323 ntBASIC6.18□□□□□ -1.42
MRE11P49959 RNU6-1129P-201ENST00000515964 104 ntBASIC6.18□□□□□ -1.42
MRE11P49959 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC6.18□□□□□ -1.42
MRE11P49959 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC6.18□□□□□ -1.42
MRE11P49959 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.18□□□□□ -1.42
MRE11P49959 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.18□□□□□ -1.42
MRE11P49959 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MRE11P49959 AC084824.1-201ENST00000550917 1005 ntBASIC6.18□□□□□ -1.42
MRE11P49959 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
MRE11P49959 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC6.18□□□□□ -1.42
MRE11P49959 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC6.18□□□□□ -1.42
MRE11P49959 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.18□□□□□ -1.42
MRE11P49959 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC6.18□□□□□ -1.42
MRE11P49959 AC015802.2-201ENST00000589690 189 ntBASIC6.18□□□□□ -1.42
MRE11P49959 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.18□□□□□ -1.42
MRE11P49959 AC005021.1-201ENST00000608730 355 ntBASIC6.18□□□□□ -1.42
MRE11P49959 RDM1-219ENST00000615378 542 ntTSL 3 BASIC6.18□□□□□ -1.42
MRE11P49959 AC025574.2-201ENST00000615621 514 ntBASIC6.18□□□□□ -1.42
MRE11P49959 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC6.18□□□□□ -1.42
MRE11P49959 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
MRE11P49959 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MRE11P49959 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.18□□□□□ -1.42
MRE11P49959 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MRE11P49959 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC6.18□□□□□ -1.42
MRE11P49959 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms