Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 USP9YP21-201ENST00000420603 432 ntBASIC5.69□□□□□ -1.5
TM4SF4P48230 AL358176.3-201ENST00000420757 454 ntBASIC5.69□□□□□ -1.5
TM4SF4P48230 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.69□□□□□ -1.5
TM4SF4P48230 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.69□□□□□ -1.5
TM4SF4P48230 OR5AW1P-201ENST00000426334 1006 ntBASIC5.69□□□□□ -1.5
TM4SF4P48230 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.69□□□□□ -1.5
TM4SF4P48230 AL162591.2-201ENST00000449634 317 ntBASIC5.69□□□□□ -1.5
TM4SF4P48230 RNU6-1218P-201ENST00000458990 108 ntBASIC5.69□□□□□ -1.5
TM4SF4P48230 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.69□□□□□ -1.5
TM4SF4P48230 RN7SL814P-201ENST00000487715 300 ntBASIC5.69□□□□□ -1.5
TM4SF4P48230 IGBP1P4-201ENST00000503202 879 ntBASIC5.69□□□□□ -1.5
TM4SF4P48230 AC098976.1-201ENST00000513014 541 ntBASIC5.69□□□□□ -1.5
TM4SF4P48230 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.69□□□□□ -1.5
TM4SF4P48230 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.69□□□□□ -1.5
TM4SF4P48230 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.69□□□□□ -1.5
TM4SF4P48230 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TM4SF4P48230 AC133555.2-201ENST00000550213 292 ntBASIC5.69□□□□□ -1.5
TM4SF4P48230 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.69□□□□□ -1.5
TM4SF4P48230 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.69□□□□□ -1.5
TM4SF4P48230 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.69□□□□□ -1.5
TM4SF4P48230 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.69□□□□□ -1.5
TM4SF4P48230 AC069366.1-201ENST00000583159 838 ntBASIC5.69□□□□□ -1.5
TM4SF4P48230 MIR3138-201ENST00000585238 82 ntBASIC5.69□□□□□ -1.5
TM4SF4P48230 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TM4SF4P48230 AC108738.1-201ENST00000603703 237 ntBASIC5.69□□□□□ -1.5
TM4SF4P48230 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TM4SF4P48230 FAM27B-201ENST00000610601 213 ntBASIC5.69□□□□□ -1.5
TM4SF4P48230 PART1_2.1-201ENST00000612397 250 ntBASIC5.69□□□□□ -1.5
TM4SF4P48230 VN1R74P-201ENST00000613259 503 ntBASIC5.69□□□□□ -1.5
TM4SF4P48230 AL031658.2-201ENST00000616850 651 ntBASIC5.69□□□□□ -1.5
TM4SF4P48230 AL121890.2-201ENST00000617644 465 ntBASIC5.69□□□□□ -1.5
TM4SF4P48230 AL035461.2-201ENST00000619201 524 ntBASIC5.69□□□□□ -1.5
TM4SF4P48230 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
TM4SF4P48230 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TM4SF4P48230 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.69□□□□□ -1.5
TM4SF4P48230 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TM4SF4P48230 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TM4SF4P48230 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
TM4SF4P48230 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
TM4SF4P48230 TRIM51GP-201ENST00000534741 1350 ntBASIC5.68□□□□□ -1.5
TM4SF4P48230 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TM4SF4P48230 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TM4SF4P48230 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TM4SF4P48230 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.68□□□□□ -1.5
TM4SF4P48230 ECM1P2-201ENST00000503354 1577 ntBASIC5.68□□□□□ -1.5
TM4SF4P48230 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TM4SF4P48230 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
TM4SF4P48230 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TM4SF4P48230 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TM4SF4P48230 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TM4SF4P48230 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.68□□□□□ -1.5
TM4SF4P48230 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.68□□□□□ -1.5
TM4SF4P48230 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.68□□□□□ -1.5
TM4SF4P48230 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TM4SF4P48230 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TM4SF4P48230 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TM4SF4P48230 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.68□□□□□ -1.5
TM4SF4P48230 U3.30-201ENST00000391308 210 ntBASIC5.68□□□□□ -1.5
TM4SF4P48230 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TM4SF4P48230 OR6C69P-201ENST00000394268 893 ntBASIC5.68□□□□□ -1.5
TM4SF4P48230 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
TM4SF4P48230 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.68□□□□□ -1.5
TM4SF4P48230 MTND4P3-201ENST00000417829 541 ntBASIC5.68□□□□□ -1.5
TM4SF4P48230 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.68□□□□□ -1.5
TM4SF4P48230 FABP7P1-201ENST00000424004 391 ntBASIC5.68□□□□□ -1.5
TM4SF4P48230 OSTCP5-201ENST00000425293 453 ntBASIC5.68□□□□□ -1.5
TM4SF4P48230 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.68□□□□□ -1.5
TM4SF4P48230 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.68□□□□□ -1.5
TM4SF4P48230 MED28P3-201ENST00000444288 531 ntBASIC5.68□□□□□ -1.5
TM4SF4P48230 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.68□□□□□ -1.5
TM4SF4P48230 NPM1P39-201ENST00000449818 867 ntBASIC5.68□□□□□ -1.5
TM4SF4P48230 AC034236.1-201ENST00000469891 373 ntBASIC5.68□□□□□ -1.5
TM4SF4P48230 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.68□□□□□ -1.5
TM4SF4P48230 IGKV2-36-201ENST00000519999 223 ntBASIC5.68□□□□□ -1.5
TM4SF4P48230 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.68□□□□□ -1.5
TM4SF4P48230 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TM4SF4P48230 AP001804.1-201ENST00000526868 919 ntBASIC5.68□□□□□ -1.5
TM4SF4P48230 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.68□□□□□ -1.5
TM4SF4P48230 AC124293.1-201ENST00000530034 493 ntBASIC5.68□□□□□ -1.5
TM4SF4P48230 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.68□□□□□ -1.5
TM4SF4P48230 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TM4SF4P48230 AC084783.1-201ENST00000565846 910 ntBASIC5.68□□□□□ -1.5
TM4SF4P48230 AC090751.1-201ENST00000566966 267 ntBASIC5.68□□□□□ -1.5
TM4SF4P48230 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.68□□□□□ -1.5
TM4SF4P48230 MIR4420-201ENST00000583944 77 ntBASIC5.68□□□□□ -1.5
TM4SF4P48230 AP001542.2-201ENST00000593141 364 ntBASIC5.68□□□□□ -1.5
TM4SF4P48230 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TM4SF4P48230 AC013468.1-201ENST00000608680 598 ntBASIC5.68□□□□□ -1.5
TM4SF4P48230 AC006946.3-201ENST00000609791 756 ntBASIC5.68□□□□□ -1.5
TM4SF4P48230 AC023509.5-201ENST00000617434 807 ntBASIC5.68□□□□□ -1.5
TM4SF4P48230 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.68□□□□□ -1.5
TM4SF4P48230 AC109454.4-201ENST00000623411 649 ntBASIC5.68□□□□□ -1.5
TM4SF4P48230 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.68□□□□□ -1.5
TM4SF4P48230 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
TM4SF4P48230 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.68□□□□□ -1.5
TM4SF4P48230 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TM4SF4P48230 AC120338.1-201ENST00000625074 1541 ntBASIC5.68□□□□□ -1.5
TM4SF4P48230 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TM4SF4P48230 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TM4SF4P48230 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms