Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AL353726.1-201ENST00000614041 1000 ntBASIC4.21□□□□□ -1.74
CDX1P47902 uc_338.18-201ENST00000615451 175 ntBASIC4.21□□□□□ -1.74
CDX1P47902 RNU6-489P-201ENST00000618289 107 ntBASIC4.21□□□□□ -1.74
CDX1P47902 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.21□□□□□ -1.74
CDX1P47902 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CDX1P47902 AL450345.1-202ENST00000605741 3881 ntBASIC4.21□□□□□ -1.74
CDX1P47902 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDX1P47902 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDX1P47902 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CDX1P47902 AC100757.1-201ENST00000616872 1835 ntBASIC4.21□□□□□ -1.74
CDX1P47902 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CDX1P47902 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDX1P47902 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDX1P47902 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDX1P47902 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CDX1P47902 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.2□□□□□ -1.74
CDX1P47902 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDX1P47902 RNU6-1257P-201ENST00000384625 110 ntBASIC4.2□□□□□ -1.74
CDX1P47902 MIR105-2-201ENST00000385083 81 ntBASIC4.2□□□□□ -1.74
CDX1P47902 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.2□□□□□ -1.74
CDX1P47902 LAP3P1-201ENST00000403648 294 ntBASIC4.2□□□□□ -1.74
CDX1P47902 AL133388.1-201ENST00000404509 287 ntBASIC4.2□□□□□ -1.74
CDX1P47902 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.2□□□□□ -1.74
CDX1P47902 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.2□□□□□ -1.74
CDX1P47902 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.2□□□□□ -1.74
CDX1P47902 MTND2P15-201ENST00000418575 892 ntBASIC4.2□□□□□ -1.74
CDX1P47902 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.2□□□□□ -1.74
CDX1P47902 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.2□□□□□ -1.74
CDX1P47902 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.2□□□□□ -1.74
CDX1P47902 RPS6P14-201ENST00000425165 719 ntBASIC4.2□□□□□ -1.74
CDX1P47902 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.2□□□□□ -1.74
CDX1P47902 AL138785.1-201ENST00000425821 331 ntBASIC4.2□□□□□ -1.74
CDX1P47902 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.2□□□□□ -1.74
CDX1P47902 RPL21P110-201ENST00000433345 446 ntBASIC4.2□□□□□ -1.74
CDX1P47902 TXNP5-201ENST00000441043 315 ntBASIC4.2□□□□□ -1.74
CDX1P47902 HMGB3P9-201ENST00000441799 583 ntBASIC4.2□□□□□ -1.74
CDX1P47902 AL592437.1-201ENST00000443781 492 ntBASIC4.2□□□□□ -1.74
CDX1P47902 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.2□□□□□ -1.74
CDX1P47902 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.2□□□□□ -1.74
CDX1P47902 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.2□□□□□ -1.74
CDX1P47902 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.2□□□□□ -1.74
CDX1P47902 IFNWP4-201ENST00000453148 294 ntBASIC4.2□□□□□ -1.74
CDX1P47902 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.2□□□□□ -1.74
CDX1P47902 AC096992.1-201ENST00000459808 709 ntBASIC4.2□□□□□ -1.74
CDX1P47902 RPL7P6-201ENST00000480903 738 ntBASIC4.2□□□□□ -1.74
CDX1P47902 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDX1P47902 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.2□□□□□ -1.74
CDX1P47902 AC109464.1-201ENST00000511091 819 ntBASIC4.2□□□□□ -1.74
CDX1P47902 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.2□□□□□ -1.74
CDX1P47902 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.2□□□□□ -1.74
CDX1P47902 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.2□□□□□ -1.74
CDX1P47902 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.2□□□□□ -1.74
CDX1P47902 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDX1P47902 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.2□□□□□ -1.74
CDX1P47902 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.2□□□□□ -1.74
CDX1P47902 RPL26P30-202ENST00000602923 645 ntBASIC4.2□□□□□ -1.74
CDX1P47902 AC009237.13-201ENST00000603193 276 ntBASIC4.2□□□□□ -1.74
CDX1P47902 AC009948.4-201ENST00000604692 675 ntBASIC4.2□□□□□ -1.74
CDX1P47902 AL139022.2-201ENST00000606934 443 ntBASIC4.2□□□□□ -1.74
CDX1P47902 SDR42E1P1-201ENST00000611327 477 ntBASIC4.2□□□□□ -1.74
CDX1P47902 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.2□□□□□ -1.74
CDX1P47902 AC073869.8-201ENST00000641806 335 ntBASIC4.2□□□□□ -1.74
CDX1P47902 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CDX1P47902 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDX1P47902 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.2□□□□□ -1.74
CDX1P47902 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDX1P47902 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.2□□□□□ -1.74
CDX1P47902 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDX1P47902 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.2□□□□□ -1.74
CDX1P47902 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.2□□□□□ -1.74
CDX1P47902 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDX1P47902 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDX1P47902 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDX1P47902 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.19□□□□□ -1.74
CDX1P47902 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CDX1P47902 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDX1P47902 AL512646.1-201ENST00000269395 1077 ntBASIC4.19□□□□□ -1.74
CDX1P47902 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDX1P47902 RNU6-77P-201ENST00000410554 91 ntBASIC4.19□□□□□ -1.74
CDX1P47902 AC096533.1-201ENST00000411645 353 ntBASIC4.19□□□□□ -1.74
CDX1P47902 PRELID3BP11-201ENST00000414230 479 ntBASIC4.19□□□□□ -1.74
CDX1P47902 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.19□□□□□ -1.74
CDX1P47902 OR2X1P-201ENST00000421144 687 ntBASIC4.19□□□□□ -1.74
CDX1P47902 GAPDHP49-201ENST00000421421 961 ntBASIC4.19□□□□□ -1.74
CDX1P47902 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.19□□□□□ -1.74
CDX1P47902 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.19□□□□□ -1.74
CDX1P47902 OR52B5P-201ENST00000435337 951 ntBASIC4.19□□□□□ -1.74
CDX1P47902 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.19□□□□□ -1.74
CDX1P47902 RPL35AP21-201ENST00000437667 333 ntBASIC4.19□□□□□ -1.74
CDX1P47902 AC105402.2-201ENST00000438503 358 ntBASIC4.19□□□□□ -1.74
CDX1P47902 AC004865.1-201ENST00000442276 1003 ntBASIC4.19□□□□□ -1.74
CDX1P47902 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.19□□□□□ -1.74
CDX1P47902 MTND1P33-201ENST00000446251 917 ntBASIC4.19□□□□□ -1.74
CDX1P47902 SEPT14P24-201ENST00000447236 180 ntBASIC4.19□□□□□ -1.74
CDX1P47902 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.19□□□□□ -1.74
CDX1P47902 RPS26P41-201ENST00000450370 284 ntBASIC4.19□□□□□ -1.74
CDX1P47902 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.19□□□□□ -1.74
CDX1P47902 CDC42P1-201ENST00000456658 548 ntBASIC4.19□□□□□ -1.74
CDX1P47902 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.19□□□□□ -1.74
CDX1P47902 AC079841.1-201ENST00000481228 950 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms