Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC091167.1-201ENST00000492017 396 ntBASIC4.72□□□□□ -1.65
BRCC3P46736 RN7SKP21-201ENST00000516503 220 ntBASIC4.72□□□□□ -1.65
BRCC3P46736 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.72□□□□□ -1.65
BRCC3P46736 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
BRCC3P46736 TOMM20P2-201ENST00000540082 421 ntBASIC4.72□□□□□ -1.65
BRCC3P46736 AC090515.3-201ENST00000560431 315 ntBASIC4.72□□□□□ -1.65
BRCC3P46736 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.72□□□□□ -1.65
BRCC3P46736 SNORD39.2-201ENST00000579995 76 ntBASIC4.72□□□□□ -1.65
BRCC3P46736 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.72□□□□□ -1.65
BRCC3P46736 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.72□□□□□ -1.65
BRCC3P46736 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.72□□□□□ -1.65
BRCC3P46736 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.72□□□□□ -1.65
BRCC3P46736 AL139254.3-201ENST00000641097 674 ntBASIC4.72□□□□□ -1.65
BRCC3P46736 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
BRCC3P46736 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.72□□□□□ -1.65
BRCC3P46736 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
BRCC3P46736 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
BRCC3P46736 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
BRCC3P46736 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
BRCC3P46736 MFSD8-220ENST00000641243 1422 ntBASIC4.72□□□□□ -1.65
BRCC3P46736 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
BRCC3P46736 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
BRCC3P46736 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
BRCC3P46736 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
BRCC3P46736 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
BRCC3P46736 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
BRCC3P46736 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.71□□□□□ -1.66
BRCC3P46736 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
BRCC3P46736 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
BRCC3P46736 AL121657.1-201ENST00000327215 531 ntBASIC4.71□□□□□ -1.66
BRCC3P46736 RNA5SP366-201ENST00000365454 123 ntBASIC4.71□□□□□ -1.66
BRCC3P46736 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
BRCC3P46736 RNU1-63P-201ENST00000383902 164 ntBASIC4.71□□□□□ -1.66
BRCC3P46736 MIR3065-201ENST00000390137 79 ntBASIC4.71□□□□□ -1.66
BRCC3P46736 RNU6-564P-201ENST00000410983 104 ntBASIC4.71□□□□□ -1.66
BRCC3P46736 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.71□□□□□ -1.66
BRCC3P46736 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
BRCC3P46736 RPL7P33-201ENST00000444159 742 ntBASIC4.71□□□□□ -1.66
BRCC3P46736 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.71□□□□□ -1.66
BRCC3P46736 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
BRCC3P46736 AL591473.1-201ENST00000464297 313 ntBASIC4.71□□□□□ -1.66
BRCC3P46736 UQCRHP4-201ENST00000471686 272 ntBASIC4.71□□□□□ -1.66
BRCC3P46736 OR52A4P-202ENST00000481634 799 ntBASIC4.71□□□□□ -1.66
BRCC3P46736 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.71□□□□□ -1.66
BRCC3P46736 RNA5SP446-201ENST00000515955 82 ntBASIC4.71□□□□□ -1.66
BRCC3P46736 MRPL49P2-201ENST00000521066 465 ntBASIC4.71□□□□□ -1.66
BRCC3P46736 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC4.71□□□□□ -1.66
BRCC3P46736 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.71□□□□□ -1.66
BRCC3P46736 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.71□□□□□ -1.66
BRCC3P46736 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.71□□□□□ -1.66
BRCC3P46736 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.71□□□□□ -1.66
BRCC3P46736 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.71□□□□□ -1.66
BRCC3P46736 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.71□□□□□ -1.66
BRCC3P46736 AC079587.1-201ENST00000603846 277 ntBASIC4.71□□□□□ -1.66
BRCC3P46736 IMMP1LP1-201ENST00000605170 488 ntBASIC4.71□□□□□ -1.66
BRCC3P46736 AL008729.2-201ENST00000606393 473 ntBASIC4.71□□□□□ -1.66
BRCC3P46736 MIR8069-1-201ENST00000616627 86 ntBASIC4.71□□□□□ -1.66
BRCC3P46736 MIR8069-2-201ENST00000621412 86 ntBASIC4.71□□□□□ -1.66
BRCC3P46736 AC104820.1-201ENST00000624183 307 ntBASIC4.71□□□□□ -1.66
BRCC3P46736 MIR3653-201ENST00000625572 110 ntBASIC4.71□□□□□ -1.66
BRCC3P46736 MFSD8-242ENST00000641690 4199 ntBASIC4.71□□□□□ -1.66
BRCC3P46736 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
BRCC3P46736 AL158163.1-201ENST00000603915 1649 ntBASIC4.71□□□□□ -1.66
BRCC3P46736 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
BRCC3P46736 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
BRCC3P46736 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.71□□□□□ -1.66
BRCC3P46736 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
BRCC3P46736 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.71□□□□□ -1.66
BRCC3P46736 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.7□□□□□ -1.66
BRCC3P46736 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
BRCC3P46736 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.7□□□□□ -1.66
BRCC3P46736 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
BRCC3P46736 AC009951.1-201ENST00000623674 2614 ntBASIC4.7□□□□□ -1.66
BRCC3P46736 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.7□□□□□ -1.66
BRCC3P46736 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
BRCC3P46736 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.7□□□□□ -1.66
BRCC3P46736 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
BRCC3P46736 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
BRCC3P46736 RNU6-386P-201ENST00000362650 107 ntBASIC4.7□□□□□ -1.66
BRCC3P46736 SNORA11F-201ENST00000408237 128 ntBASIC4.7□□□□□ -1.66
BRCC3P46736 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.7□□□□□ -1.66
BRCC3P46736 RPL36AP10-201ENST00000421785 322 ntBASIC4.7□□□□□ -1.66
BRCC3P46736 GTF2IP2-201ENST00000424290 697 ntBASIC4.7□□□□□ -1.66
BRCC3P46736 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.7□□□□□ -1.66
BRCC3P46736 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.7□□□□□ -1.66
BRCC3P46736 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.7□□□□□ -1.66
BRCC3P46736 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.7□□□□□ -1.66
BRCC3P46736 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.7□□□□□ -1.66
BRCC3P46736 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.7□□□□□ -1.66
BRCC3P46736 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.7□□□□□ -1.66
BRCC3P46736 RPL23AP37-201ENST00000479658 549 ntBASIC4.7□□□□□ -1.66
BRCC3P46736 ATP1B1P1-201ENST00000509767 915 ntBASIC4.7□□□□□ -1.66
BRCC3P46736 PARP4P3-201ENST00000510265 317 ntBASIC4.7□□□□□ -1.66
BRCC3P46736 SEC11B-201ENST00000518383 499 ntBASIC4.7□□□□□ -1.66
BRCC3P46736 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.7□□□□□ -1.66
BRCC3P46736 AL109766.1-201ENST00000555080 552 ntBASIC4.7□□□□□ -1.66
BRCC3P46736 AC009268.1-201ENST00000561352 1203 ntBASIC4.7□□□□□ -1.66
BRCC3P46736 RN7SL176P-201ENST00000580352 264 ntBASIC4.7□□□□□ -1.66
BRCC3P46736 AC008966.2-201ENST00000606157 453 ntBASIC4.7□□□□□ -1.66
BRCC3P46736 AC010857.1-201ENST00000606398 594 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms