Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL4A5P29400 ERCC6-202ENST00000374127 1782 ntBASIC4.92□□□□□ -1.62
COL4A5P29400 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.92□□□□□ -1.62
COL4A5P29400 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.92□□□□□ -1.62
COL4A5P29400 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.92□□□□□ -1.62
COL4A5P29400 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.92□□□□□ -1.62
COL4A5P29400 PRDX3P3-201ENST00000447765 522 ntBASIC4.92□□□□□ -1.62
COL4A5P29400 RPS26P28-201ENST00000470806 348 ntBASIC4.92□□□□□ -1.62
COL4A5P29400 CDH12P2-201ENST00000504393 298 ntBASIC4.92□□□□□ -1.62
COL4A5P29400 NDUFA5P2-201ENST00000519723 344 ntBASIC4.92□□□□□ -1.62
COL4A5P29400 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.92□□□□□ -1.62
COL4A5P29400 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.92□□□□□ -1.62
COL4A5P29400 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.92□□□□□ -1.62
COL4A5P29400 AC018816.2-201ENST00000621460 353 ntBASIC4.92□□□□□ -1.62
COL4A5P29400 AC073530.2-201ENST00000623987 261 ntBASIC4.92□□□□□ -1.62
COL4A5P29400 AL672167.1-205ENST00000641112 3080 ntBASIC4.92□□□□□ -1.62
COL4A5P29400 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC4.92□□□□□ -1.62
COL4A5P29400 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC4.92□□□□□ -1.62
COL4A5P29400 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL4A5P29400 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
COL4A5P29400 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL4A5P29400 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL4A5P29400 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.91□□□□□ -1.62
COL4A5P29400 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.91□□□□□ -1.62
COL4A5P29400 AL139247.1-201ENST00000422768 325 ntBASIC4.91□□□□□ -1.62
COL4A5P29400 OR2AH1P-201ENST00000425717 928 ntBASIC4.91□□□□□ -1.62
COL4A5P29400 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.91□□□□□ -1.62
COL4A5P29400 PPIAP3-201ENST00000450588 505 ntBASIC4.91□□□□□ -1.62
COL4A5P29400 AC108751.2-201ENST00000469993 231 ntBASIC4.91□□□□□ -1.62
COL4A5P29400 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.91□□□□□ -1.62
COL4A5P29400 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.91□□□□□ -1.62
COL4A5P29400 AC093014.1-201ENST00000548926 724 ntBASIC4.91□□□□□ -1.62
COL4A5P29400 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.91□□□□□ -1.62
COL4A5P29400 HMGB2P1-201ENST00000591146 634 ntBASIC4.91□□□□□ -1.62
COL4A5P29400 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
COL4A5P29400 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL4A5P29400 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.91□□□□□ -1.62
COL4A5P29400 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL4A5P29400 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL4A5P29400 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL4A5P29400 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL4A5P29400 HSPD1P14-201ENST00000432666 1618 ntBASIC4.9□□□□□ -1.62
COL4A5P29400 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL4A5P29400 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL4A5P29400 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
COL4A5P29400 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL4A5P29400 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL4A5P29400 RNA5SP399-201ENST00000364003 117 ntBASIC4.9□□□□□ -1.62
COL4A5P29400 AL078604.1-201ENST00000404609 466 ntBASIC4.9□□□□□ -1.62
COL4A5P29400 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.9□□□□□ -1.62
COL4A5P29400 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
COL4A5P29400 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.9□□□□□ -1.62
COL4A5P29400 RPL36AP13-201ENST00000457490 317 ntBASIC4.9□□□□□ -1.62
COL4A5P29400 RPS3AP6-201ENST00000484430 795 ntBASIC4.9□□□□□ -1.62
COL4A5P29400 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.9□□□□□ -1.62
COL4A5P29400 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.9□□□□□ -1.62
COL4A5P29400 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.9□□□□□ -1.62
COL4A5P29400 VN1R92P-201ENST00000598511 928 ntBASIC4.9□□□□□ -1.62
COL4A5P29400 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.9□□□□□ -1.62
COL4A5P29400 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL4A5P29400 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL4A5P29400 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
COL4A5P29400 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL4A5P29400 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.9□□□□□ -1.63
COL4A5P29400 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL4A5P29400 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.9□□□□□ -1.63
COL4A5P29400 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.89□□□□□ -1.63
COL4A5P29400 U1.1-201ENST00000384101 164 ntBASIC4.89□□□□□ -1.63
COL4A5P29400 SNORD3H-201ENST00000384486 214 ntBASIC4.89□□□□□ -1.63
COL4A5P29400 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A5P29400 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.89□□□□□ -1.63
COL4A5P29400 TRIM60P17-201ENST00000415181 719 ntBASIC4.89□□□□□ -1.63
COL4A5P29400 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.89□□□□□ -1.63
COL4A5P29400 KRR1P1-201ENST00000419430 803 ntBASIC4.89□□□□□ -1.63
COL4A5P29400 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.89□□□□□ -1.63
COL4A5P29400 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.89□□□□□ -1.63
COL4A5P29400 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.89□□□□□ -1.63
COL4A5P29400 AC244505.7-201ENST00000599675 272 ntBASIC4.89□□□□□ -1.63
COL4A5P29400 AL049634.3-201ENST00000604968 457 ntBASIC4.89□□□□□ -1.63
COL4A5P29400 AL159169.3-201ENST00000608871 561 ntBASIC4.89□□□□□ -1.63
COL4A5P29400 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.89□□□□□ -1.63
COL4A5P29400 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A5P29400 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A5P29400 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A5P29400 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A5P29400 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A5P29400 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A5P29400 AL731532.2-201ENST00000623542 1953 ntBASIC4.89□□□□□ -1.63
COL4A5P29400 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A5P29400 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A5P29400 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A5P29400 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A5P29400 RNA5SP187-201ENST00000384400 119 ntBASIC4.89□□□□□ -1.63
COL4A5P29400 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A5P29400 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.89□□□□□ -1.63
COL4A5P29400 AC245052.5-201ENST00000416320 649 ntBASIC4.89□□□□□ -1.63
COL4A5P29400 AL159987.2-201ENST00000432754 307 ntBASIC4.89□□□□□ -1.63
COL4A5P29400 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.89□□□□□ -1.63
COL4A5P29400 AC115115.1-201ENST00000449927 248 ntBASIC4.89□□□□□ -1.63
COL4A5P29400 AL451050.1-201ENST00000450126 415 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms