Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CYCSP10-201ENST00000417973 294 ntBASIC3.65□□□□□ -1.83
COL8A2P25067 MFSD13B-201ENST00000420133 1290 ntBASIC3.65□□□□□ -1.83
COL8A2P25067 AC007064.3-201ENST00000422608 359 ntBASIC3.65□□□□□ -1.83
COL8A2P25067 RPS27AP12-201ENST00000429552 465 ntBASIC3.65□□□□□ -1.83
COL8A2P25067 AL132765.1-201ENST00000434165 553 ntBASIC3.65□□□□□ -1.83
COL8A2P25067 AL512326.1-201ENST00000443050 721 ntBASIC3.65□□□□□ -1.83
COL8A2P25067 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.65□□□□□ -1.83
COL8A2P25067 AC009963.2-201ENST00000453431 138 ntBASIC3.65□□□□□ -1.83
COL8A2P25067 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.65□□□□□ -1.83
COL8A2P25067 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.65□□□□□ -1.83
COL8A2P25067 RPL5P16-201ENST00000471467 790 ntBASIC3.65□□□□□ -1.83
COL8A2P25067 RN7SL817P-201ENST00000480777 288 ntBASIC3.65□□□□□ -1.83
COL8A2P25067 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
COL8A2P25067 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.65□□□□□ -1.83
COL8A2P25067 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.65□□□□□ -1.83
COL8A2P25067 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.65□□□□□ -1.83
COL8A2P25067 AC008958.1-201ENST00000511047 682 ntBASIC3.65□□□□□ -1.83
COL8A2P25067 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
COL8A2P25067 MTCO1P35-201ENST00000515270 228 ntBASIC3.65□□□□□ -1.83
COL8A2P25067 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
COL8A2P25067 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.65□□□□□ -1.83
COL8A2P25067 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
COL8A2P25067 AC021483.2-201ENST00000567415 758 ntBASIC3.65□□□□□ -1.83
COL8A2P25067 AC010547.7-201ENST00000570323 333 ntBASIC3.65□□□□□ -1.83
COL8A2P25067 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.65□□□□□ -1.83
COL8A2P25067 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC3.65□□□□□ -1.83
COL8A2P25067 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.65□□□□□ -1.83
COL8A2P25067 Z98200.1-201ENST00000607298 470 ntBASIC3.65□□□□□ -1.83
COL8A2P25067 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.65□□□□□ -1.83
COL8A2P25067 LINC00901.1-201ENST00000617252 152 ntBASIC3.65□□□□□ -1.83
COL8A2P25067 AL121890.2-201ENST00000617644 465 ntBASIC3.65□□□□□ -1.83
COL8A2P25067 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.65□□□□□ -1.83
COL8A2P25067 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.65□□□□□ -1.83
COL8A2P25067 FP325313.1-201ENST00000638228 703 ntBASIC3.65□□□□□ -1.83
COL8A2P25067 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.65□□□□□ -1.83
COL8A2P25067 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
COL8A2P25067 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
COL8A2P25067 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
COL8A2P25067 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
COL8A2P25067 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
COL8A2P25067 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
COL8A2P25067 VPS35P1-201ENST00000563400 1518 ntBASIC3.65□□□□□ -1.83
COL8A2P25067 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
COL8A2P25067 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC3.64□□□□□ -1.83
COL8A2P25067 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL8A2P25067 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL8A2P25067 CA1-225ENST00000626824 2405 ntTSL 5 BASIC3.64□□□□□ -1.83
COL8A2P25067 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL8A2P25067 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
COL8A2P25067 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
COL8A2P25067 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL8A2P25067 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
COL8A2P25067 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
COL8A2P25067 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL8A2P25067 IL6STP1-201ENST00000346911 1020 ntBASIC3.64□□□□□ -1.83
COL8A2P25067 RNA5SP307-201ENST00000362863 116 ntBASIC3.64□□□□□ -1.83
COL8A2P25067 RNU1-20P-201ENST00000363314 162 ntBASIC3.64□□□□□ -1.83
COL8A2P25067 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL8A2P25067 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL8A2P25067 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
COL8A2P25067 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL8A2P25067 RPS26P8-201ENST00000393490 348 ntBASIC3.64□□□□□ -1.83
COL8A2P25067 AL161909.1-201ENST00000397390 712 ntBASIC3.64□□□□□ -1.83
COL8A2P25067 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL8A2P25067 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.64□□□□□ -1.83
COL8A2P25067 RN7SKP235-201ENST00000410662 305 ntBASIC3.64□□□□□ -1.83
COL8A2P25067 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.64□□□□□ -1.83
COL8A2P25067 GTF2IP2-201ENST00000424290 697 ntBASIC3.64□□□□□ -1.83
COL8A2P25067 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.64□□□□□ -1.83
COL8A2P25067 AL157831.1-201ENST00000426134 473 ntBASIC3.64□□□□□ -1.83
COL8A2P25067 RPEP2-201ENST00000432149 701 ntBASIC3.64□□□□□ -1.83
COL8A2P25067 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.64□□□□□ -1.83
COL8A2P25067 RPL7P19-201ENST00000469948 618 ntBASIC3.64□□□□□ -1.83
COL8A2P25067 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
COL8A2P25067 RPL35P6-201ENST00000490024 372 ntBASIC3.64□□□□□ -1.83
COL8A2P25067 RN7SL691P-201ENST00000494487 301 ntBASIC3.64□□□□□ -1.83
COL8A2P25067 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC3.64□□□□□ -1.83
COL8A2P25067 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.64□□□□□ -1.83
COL8A2P25067 KCTD9P2-201ENST00000512203 1013 ntBASIC3.64□□□□□ -1.83
COL8A2P25067 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.64□□□□□ -1.83
COL8A2P25067 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.64□□□□□ -1.83
COL8A2P25067 DYNLL1P4-201ENST00000549314 266 ntBASIC3.64□□□□□ -1.83
COL8A2P25067 AC027455.1-201ENST00000574104 594 ntBASIC3.64□□□□□ -1.83
COL8A2P25067 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.64□□□□□ -1.83
COL8A2P25067 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.64□□□□□ -1.83
COL8A2P25067 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.64□□□□□ -1.83
COL8A2P25067 AC010857.1-201ENST00000606398 594 ntBASIC3.64□□□□□ -1.83
COL8A2P25067 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.64□□□□□ -1.83
COL8A2P25067 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.64□□□□□ -1.83
COL8A2P25067 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.64□□□□□ -1.83
COL8A2P25067 AC007546.2-201ENST00000623996 360 ntBASIC3.64□□□□□ -1.83
COL8A2P25067 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
COL8A2P25067 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.64□□□□□ -1.83
COL8A2P25067 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC3.64□□□□□ -1.83
COL8A2P25067 AC011503.2-201ENST00000594230 1500 ntBASIC3.64□□□□□ -1.83
COL8A2P25067 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.64□□□□□ -1.83
COL8A2P25067 AC123912.3-201ENST00000600907 1367 ntBASIC3.63□□□□□ -1.83
COL8A2P25067 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
COL8A2P25067 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
COL8A2P25067 LINC01109-201ENST00000603837 3081 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms