| TFE3 | P19532 | SRY-201 | ENST00000383070 | 845 nt | APPRIS P1 BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC117402.1-202 | ENST00000383686 | 820 nt | TSL 2 BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | RNU6-297P-201 | ENST00000384636 | 107 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | MIR1277-201 | ENST00000408536 | 78 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC099535.1-201 | ENST00000408928 | 371 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | RNA5SP251-201 | ENST00000410614 | 137 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | RNU2-6P-201 | ENST00000411404 | 190 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AL354890.1-201 | ENST00000413730 | 346 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AL109610.1-201 | ENST00000414598 | 431 nt | TSL 3 BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC005482.1-201 | ENST00000420758 | 575 nt | TSL 4 BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | FRMPD4-AS1-201 | ENST00000425057 | 285 nt | TSL 3 BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC233728.2-201 | ENST00000425348 | 757 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC099060.1-201 | ENST00000427806 | 448 nt | TSL 3 BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | RPL37P21-201 | ENST00000435890 | 276 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | BMS1P10-201 | ENST00000443754 | 1120 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AL021937.3-201 | ENST00000446543 | 361 nt | TSL 2 BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC097463.1-201 | ENST00000447288 | 481 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | LINC01809-201 | ENST00000448431 | 303 nt | TSL 1 (best) BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AL672138.1-201 | ENST00000450604 | 1015 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | MTND2P24-201 | ENST00000453434 | 806 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | SLC16A12-AS1-202 | ENST00000454270 | 478 nt | TSL 2 BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC007000.3-201 | ENST00000459742 | 617 nt | TSL 3 BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | RN7SL168P-201 | ENST00000463821 | 279 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | RN7SL170P-201 | ENST00000487098 | 295 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC090638.1-201 | ENST00000498296 | 909 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC108471.1-201 | ENST00000513977 | 287 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | RN7SKP238-201 | ENST00000516483 | 249 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | RNA5SP340-201 | ENST00000517132 | 107 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AP005436.1-201 | ENST00000531454 | 488 nt | TSL 2 BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC068587.4-201 | ENST00000533893 | 186 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC012404.1-201 | ENST00000560876 | 476 nt | TSL 3 BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC007494.1-201 | ENST00000562293 | 760 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | UBE2FP2-201 | ENST00000566646 | 462 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC005703.3-201 | ENST00000579159 | 373 nt | TSL 3 BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | ANKRD20A5P-203 | ENST00000580200 | 566 nt | TSL 5 BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AP005119.1-201 | ENST00000580956 | 292 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC011825.2-201 | ENST00000583138 | 553 nt | TSL 4 BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC117569.1-201 | ENST00000584482 | 739 nt | TSL 3 BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC119868.1-202 | ENST00000584741 | 347 nt | TSL 2 BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC243967.1-201 | ENST00000598976 | 578 nt | APPRIS P1 TSL 5 BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC010271.1-201 | ENST00000599050 | 558 nt | TSL 4 BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC010857.1-201 | ENST00000606398 | 594 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | MMP13-203 | ENST00000615555 | 1152 nt | TSL 1 (best) BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC092794.2-201 | ENST00000620933 | 563 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | PCBP1-AS1-360 | ENST00000630377 | 598 nt | TSL 5 BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC093591.3-201 | ENST00000634516 | 308 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AXDND1-201 | ENST00000367618 | 3642 nt | APPRIS P2 TSL 1 (best) BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | GVINP1-201 | ENST00000526769 | 8438 nt | TSL 1 (best) BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | F13B-201 | ENST00000367412 | 2217 nt | APPRIS P1 TSL 1 (best) BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | PCDH18-202 | ENST00000412923 | 5102 nt | APPRIS ALT1 TSL 1 (best) BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | THEMIS-206 | ENST00000630369 | 2786 nt | APPRIS ALT2 TSL 1 (best) BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | PRKDC-201 | ENST00000314191 | 13509 nt | APPRIS P4 TSL 1 (best) BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | VIP-202 | ENST00000367244 | 1584 nt | APPRIS P4 TSL 1 (best) BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | VPS13B-203 | ENST00000358544 | 14094 nt | APPRIS P4 TSL 1 (best) BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | KLHL41-201 | ENST00000284669 | 2464 nt | APPRIS P1 TSL 1 (best) BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC016583.1-201 | ENST00000624221 | 2431 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | CDKL3-210 | ENST00000523832 | 1501 nt | APPRIS ALT2 TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | SH3D19-201 | ENST00000304527 | 5273 nt | APPRIS P3 TSL 2 BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC005225.5-201 | ENST00000623547 | 2225 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | ZPLD1-201 | ENST00000306176 | 3619 nt | TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | PBRM1-207 | ENST00000409767 | 4849 nt | TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AP002001.2-201 | ENST00000529025 | 1469 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | MAPK10-297 | ENST00000641287 | 3725 nt | APPRIS P2 BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | CHRDL1-202 | ENST00000372045 | 3860 nt | TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | CASP10-202 | ENST00000286186 | 5928 nt | APPRIS P4 TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | Y_RNA.9-201 | ENST00000362354 | 101 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | RN7SKP187-201 | ENST00000365536 | 330 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | SNORA77.2-201 | ENST00000408571 | 112 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC073264.1-201 | ENST00000411508 | 416 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC245096.1-201 | ENST00000413104 | 546 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC007742.1-201 | ENST00000425789 | 329 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | MIR646HG-202 | ENST00000426753 | 651 nt | TSL 2 BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC016027.5-201 | ENST00000427227 | 210 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | LINC00189-202 | ENST00000431661 | 308 nt | TSL 5 BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | LINC01797-202 | ENST00000433432 | 765 nt | TSL 3 BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AL731534.1-201 | ENST00000434711 | 269 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | ELOCP26-201 | ENST00000436067 | 329 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AMYP1-201 | ENST00000440059 | 1023 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AL354936.1-201 | ENST00000441521 | 649 nt | TSL 5 BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AL512326.1-201 | ENST00000443050 | 721 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | RPL23AP60-201 | ENST00000450011 | 454 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC016027.4-201 | ENST00000450866 | 277 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | ELOCP23-201 | ENST00000452014 | 332 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC010894.4-201 | ENST00000454203 | 457 nt | TSL 3 BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AL021940.1-201 | ENST00000454271 | 677 nt | TSL 2 BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AL034349.1-201 | ENST00000458367 | 549 nt | TSL 5 BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC091564.1-201 | ENST00000464563 | 479 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | RPL21P71-201 | ENST00000465598 | 459 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC025674.1-201 | ENST00000507074 | 324 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | DUTP7-201 | ENST00000507982 | 486 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | ADI1P3-201 | ENST00000549509 | 470 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC026826.3-201 | ENST00000561747 | 158 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC092332.1-201 | ENST00000563684 | 829 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC009039.1-201 | ENST00000568711 | 471 nt | TSL 4 BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC004034.1-201 | ENST00000573260 | 510 nt | TSL 3 BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC119403.2-201 | ENST00000590960 | 598 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | PRELID3BP8-201 | ENST00000604148 | 295 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC098614.4-201 | ENST00000607601 | 462 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC092266.1-201 | ENST00000610958 | 165 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AL359535.1-201 | ENST00000612100 | 1087 nt | BASIC | 6.3 | □□□□□ -1.4 | | |