Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.85□□□□□ -1.63
TPM3P06753 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.85□□□□□ -1.63
TPM3P06753 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.85□□□□□ -1.63
TPM3P06753 AL356535.1-201ENST00000440335 398 ntBASIC4.85□□□□□ -1.63
TPM3P06753 RPL23AP93-201ENST00000440847 484 ntBASIC4.85□□□□□ -1.63
TPM3P06753 CEACAMP7-201ENST00000444105 496 ntBASIC4.85□□□□□ -1.63
TPM3P06753 RPSAP50-201ENST00000481955 852 ntBASIC4.85□□□□□ -1.63
TPM3P06753 AC108145.1-201ENST00000503770 153 ntBASIC4.85□□□□□ -1.63
TPM3P06753 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.85□□□□□ -1.63
TPM3P06753 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.85□□□□□ -1.63
TPM3P06753 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.85□□□□□ -1.63
TPM3P06753 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.85□□□□□ -1.63
TPM3P06753 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.85□□□□□ -1.63
TPM3P06753 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.85□□□□□ -1.63
TPM3P06753 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.85□□□□□ -1.63
TPM3P06753 uc_338.32-201ENST00000615087 172 ntBASIC4.85□□□□□ -1.63
TPM3P06753 AC006065.6-201ENST00000625201 545 ntBASIC4.85□□□□□ -1.63
TPM3P06753 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
TPM3P06753 MIR4302-201ENST00000638058 60 ntBASIC4.85□□□□□ -1.63
TPM3P06753 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
TPM3P06753 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
TPM3P06753 AP000756.2-201ENST00000624168 2567 ntBASIC4.85□□□□□ -1.63
TPM3P06753 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TPM3P06753 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.84□□□□□ -1.63
TPM3P06753 FAM35DP-201ENST00000323387 2712 ntBASIC4.84□□□□□ -1.63
TPM3P06753 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
TPM3P06753 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TPM3P06753 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.84□□□□□ -1.63
TPM3P06753 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TPM3P06753 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
TPM3P06753 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
TPM3P06753 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.63
TPM3P06753 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.84□□□□□ -1.63
TPM3P06753 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.84□□□□□ -1.63
TPM3P06753 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.84□□□□□ -1.63
TPM3P06753 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.84□□□□□ -1.63
TPM3P06753 AL161631.1-201ENST00000417933 486 ntBASIC4.84□□□□□ -1.63
TPM3P06753 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.84□□□□□ -1.63
TPM3P06753 NPM1P26-201ENST00000426339 738 ntBASIC4.84□□□□□ -1.63
TPM3P06753 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.84□□□□□ -1.63
TPM3P06753 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.84□□□□□ -1.63
TPM3P06753 AL138787.1-202ENST00000437804 898 ntBASIC4.84□□□□□ -1.63
TPM3P06753 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.84□□□□□ -1.63
TPM3P06753 AF228730.2-201ENST00000438784 848 ntBASIC4.84□□□□□ -1.63
TPM3P06753 EEF1B2P5-201ENST00000444820 548 ntBASIC4.84□□□□□ -1.63
TPM3P06753 RPL23AP43-201ENST00000446445 471 ntBASIC4.84□□□□□ -1.63
TPM3P06753 AC005532.2-201ENST00000467154 373 ntBASIC4.84□□□□□ -1.63
TPM3P06753 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.84□□□□□ -1.63
TPM3P06753 MIR2114-201ENST00000516645 80 ntBASIC4.84□□□□□ -1.63
TPM3P06753 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.84□□□□□ -1.63
TPM3P06753 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.84□□□□□ -1.63
TPM3P06753 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.84□□□□□ -1.63
TPM3P06753 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.84□□□□□ -1.63
TPM3P06753 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.84□□□□□ -1.63
TPM3P06753 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.84□□□□□ -1.63
TPM3P06753 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TPM3P06753 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.84□□□□□ -1.63
TPM3P06753 AP003392.5-201ENST00000607857 415 ntBASIC4.84□□□□□ -1.63
TPM3P06753 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.84□□□□□ -1.63
TPM3P06753 AC010329.2-201ENST00000595195 2737 ntBASIC4.84□□□□□ -1.63
TPM3P06753 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.84□□□□□ -1.64
TPM3P06753 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
TPM3P06753 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
TPM3P06753 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.83□□□□□ -1.64
TPM3P06753 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TPM3P06753 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
TPM3P06753 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.83□□□□□ -1.64
TPM3P06753 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.83□□□□□ -1.64
TPM3P06753 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.83□□□□□ -1.64
TPM3P06753 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TPM3P06753 CYP1D1P-201ENST00000416662 1433 ntBASIC4.83□□□□□ -1.64
TPM3P06753 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TPM3P06753 RNA5SP191-201ENST00000362585 102 ntBASIC4.83□□□□□ -1.64
TPM3P06753 MIR1183-201ENST00000408856 89 ntBASIC4.83□□□□□ -1.64
TPM3P06753 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TPM3P06753 AL355433.1-201ENST00000422804 300 ntBASIC4.83□□□□□ -1.64
TPM3P06753 USP12PY-201ENST00000427677 1064 ntBASIC4.83□□□□□ -1.64
TPM3P06753 RPEP2-201ENST00000432149 701 ntBASIC4.83□□□□□ -1.64
TPM3P06753 YWHAQP9-201ENST00000445891 512 ntBASIC4.83□□□□□ -1.64
TPM3P06753 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.83□□□□□ -1.64
TPM3P06753 TRBV8-1-201ENST00000481590 279 ntBASIC4.83□□□□□ -1.64
TPM3P06753 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
TPM3P06753 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.83□□□□□ -1.64
TPM3P06753 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.83□□□□□ -1.64
TPM3P06753 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.83□□□□□ -1.64
TPM3P06753 CBX3P5-201ENST00000552017 521 ntBASIC4.83□□□□□ -1.64
TPM3P06753 AC018552.3-201ENST00000567416 561 ntBASIC4.83□□□□□ -1.64
TPM3P06753 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.83□□□□□ -1.64
TPM3P06753 AC098935.2-201ENST00000604222 466 ntBASIC4.83□□□□□ -1.64
TPM3P06753 AC015849.6-201ENST00000605454 474 ntBASIC4.83□□□□□ -1.64
TPM3P06753 RN7SL722P-201ENST00000617780 284 ntBASIC4.83□□□□□ -1.64
TPM3P06753 RN7SL565P-201ENST00000618246 284 ntBASIC4.83□□□□□ -1.64
TPM3P06753 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.83□□□□□ -1.64
TPM3P06753 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.83□□□□□ -1.64
TPM3P06753 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.83□□□□□ -1.64
TPM3P06753 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.83□□□□□ -1.64
TPM3P06753 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TPM3P06753 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
TPM3P06753 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TPM3P06753 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms