Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC083829.1-201ENST00000503756 657 ntBASIC4.24□□□□□ -1.73
HLA-DQB2P05538 AC093824.1-201ENST00000508796 343 ntBASIC4.24□□□□□ -1.73
HLA-DQB2P05538 AC006499.6-201ENST00000511169 607 ntBASIC4.24□□□□□ -1.73
HLA-DQB2P05538 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DQB2P05538 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DQB2P05538 AC099522.1-202ENST00000514718 367 ntBASIC4.24□□□□□ -1.73
HLA-DQB2P05538 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DQB2P05538 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DQB2P05538 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DQB2P05538 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DQB2P05538 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DQB2P05538 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.24□□□□□ -1.73
HLA-DQB2P05538 AC023575.1-201ENST00000580510 358 ntBASIC4.24□□□□□ -1.73
HLA-DQB2P05538 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.24□□□□□ -1.73
HLA-DQB2P05538 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DQB2P05538 MLECP1-201ENST00000615893 709 ntBASIC4.24□□□□□ -1.73
HLA-DQB2P05538 AL445567.2-201ENST00000618935 498 ntBASIC4.24□□□□□ -1.73
HLA-DQB2P05538 MIR6758-201ENST00000620653 63 ntBASIC4.24□□□□□ -1.73
HLA-DQB2P05538 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DQB2P05538 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DQB2P05538 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
HLA-DQB2P05538 AC092162.3-201ENST00000624511 1624 ntBASIC4.24□□□□□ -1.73
HLA-DQB2P05538 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DQB2P05538 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DQB2P05538 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
HLA-DQB2P05538 AC000123.3-201ENST00000624029 4975 ntBASIC4.23□□□□□ -1.73
HLA-DQB2P05538 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DQB2P05538 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DQB2P05538 MIR141-201ENST00000384975 95 ntBASIC4.23□□□□□ -1.73
HLA-DQB2P05538 AP000357.1-201ENST00000409926 1165 ntBASIC4.23□□□□□ -1.73
HLA-DQB2P05538 RN7SKP247-201ENST00000411094 308 ntBASIC4.23□□□□□ -1.73
HLA-DQB2P05538 RNU2-22P-201ENST00000411266 212 ntBASIC4.23□□□□□ -1.73
HLA-DQB2P05538 CYCSP10-201ENST00000417973 294 ntBASIC4.23□□□□□ -1.73
HLA-DQB2P05538 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DQB2P05538 AL358176.3-201ENST00000420757 454 ntBASIC4.23□□□□□ -1.73
HLA-DQB2P05538 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DQB2P05538 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DQB2P05538 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DQB2P05538 RAD23BP3-201ENST00000454157 1152 ntBASIC4.23□□□□□ -1.73
HLA-DQB2P05538 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.23□□□□□ -1.73
HLA-DQB2P05538 RNA5SP246-201ENST00000458909 119 ntBASIC4.23□□□□□ -1.73
HLA-DQB2P05538 AC105137.1-201ENST00000484355 562 ntBASIC4.23□□□□□ -1.73
HLA-DQB2P05538 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DQB2P05538 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DQB2P05538 OR7E10P-201ENST00000526420 991 ntBASIC4.23□□□□□ -1.73
HLA-DQB2P05538 CYCSP29-201ENST00000533731 318 ntBASIC4.23□□□□□ -1.73
HLA-DQB2P05538 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DQB2P05538 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DQB2P05538 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.23□□□□□ -1.73
HLA-DQB2P05538 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DQB2P05538 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DQB2P05538 AC069366.1-201ENST00000583159 838 ntBASIC4.23□□□□□ -1.73
HLA-DQB2P05538 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.23□□□□□ -1.73
HLA-DQB2P05538 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DQB2P05538 AF230666.2-201ENST00000602328 725 ntBASIC4.23□□□□□ -1.73
HLA-DQB2P05538 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.23□□□□□ -1.73
HLA-DQB2P05538 MIR7702-201ENST00000621931 59 ntBASIC4.23□□□□□ -1.73
HLA-DQB2P05538 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.23□□□□□ -1.73
HLA-DQB2P05538 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DQB2P05538 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DQB2P05538 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.23□□□□□ -1.73
HLA-DQB2P05538 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DQB2P05538 NAMPTP1-201ENST00000440465 2514 ntBASIC4.23□□□□□ -1.73
HLA-DQB2P05538 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DQB2P05538 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DQB2P05538 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.23□□□□□ -1.73
HLA-DQB2P05538 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DQB2P05538 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DQB2P05538 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
HLA-DQB2P05538 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.22□□□□□ -1.73
HLA-DQB2P05538 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DQB2P05538 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DQB2P05538 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DQB2P05538 RNA5SP52-201ENST00000362448 134 ntBASIC4.22□□□□□ -1.73
HLA-DQB2P05538 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
HLA-DQB2P05538 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DQB2P05538 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HLA-DQB2P05538 AC234781.4-201ENST00000419384 244 ntBASIC4.22□□□□□ -1.73
HLA-DQB2P05538 RPL23AP38-201ENST00000423801 469 ntBASIC4.22□□□□□ -1.73
HLA-DQB2P05538 H2AFZP6-201ENST00000444403 394 ntBASIC4.22□□□□□ -1.73
HLA-DQB2P05538 RPL5P16-201ENST00000471467 790 ntBASIC4.22□□□□□ -1.73
HLA-DQB2P05538 AC006517.1-201ENST00000480485 328 ntBASIC4.22□□□□□ -1.73
HLA-DQB2P05538 AC026979.1-201ENST00000492525 396 ntBASIC4.22□□□□□ -1.73
HLA-DQB2P05538 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DQB2P05538 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.22□□□□□ -1.73
HLA-DQB2P05538 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DQB2P05538 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DQB2P05538 AC134698.5-201ENST00000519444 336 ntBASIC4.22□□□□□ -1.73
HLA-DQB2P05538 GLRXP2-201ENST00000555594 321 ntBASIC4.22□□□□□ -1.73
HLA-DQB2P05538 AC011270.1-201ENST00000558606 583 ntBASIC4.22□□□□□ -1.73
HLA-DQB2P05538 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DQB2P05538 MIR3939-201ENST00000582614 106 ntBASIC4.22□□□□□ -1.73
HLA-DQB2P05538 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.22□□□□□ -1.73
HLA-DQB2P05538 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DQB2P05538 AC011477.5-201ENST00000586571 259 ntBASIC4.22□□□□□ -1.73
HLA-DQB2P05538 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DQB2P05538 AC005962.2-201ENST00000611427 652 ntBASIC4.22□□□□□ -1.73
HLA-DQB2P05538 MIR378J-201ENST00000611988 109 ntBASIC4.22□□□□□ -1.73
HLA-DQB2P05538 AC015922.4-201ENST00000612568 690 ntBASIC4.22□□□□□ -1.73
HLA-DQB2P05538 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms