Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 MIR93-201ENST00000385024 80 ntBASIC4.27□□□□□ -1.73
SEMA3DO95025 AL603766.1-201ENST00000407763 664 ntBASIC4.27□□□□□ -1.73
SEMA3DO95025 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.27□□□□□ -1.73
SEMA3DO95025 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SEMA3DO95025 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SEMA3DO95025 AC004552.1-201ENST00000419089 348 ntBASIC4.27□□□□□ -1.73
SEMA3DO95025 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.27□□□□□ -1.73
SEMA3DO95025 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.27□□□□□ -1.73
SEMA3DO95025 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.27□□□□□ -1.73
SEMA3DO95025 MTCO3P17-201ENST00000443775 513 ntBASIC4.27□□□□□ -1.73
SEMA3DO95025 CASP3P1-201ENST00000446037 609 ntBASIC4.27□□□□□ -1.73
SEMA3DO95025 RPS27AP15-201ENST00000447672 466 ntBASIC4.27□□□□□ -1.73
SEMA3DO95025 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.27□□□□□ -1.73
SEMA3DO95025 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.27□□□□□ -1.73
SEMA3DO95025 CEACAMP6-201ENST00000452007 574 ntBASIC4.27□□□□□ -1.73
SEMA3DO95025 CLIC4P1-201ENST00000453177 535 ntBASIC4.27□□□□□ -1.73
SEMA3DO95025 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.27□□□□□ -1.73
SEMA3DO95025 PSMC1P13-201ENST00000458195 985 ntBASIC4.27□□□□□ -1.73
SEMA3DO95025 RPL35AP28-201ENST00000459730 331 ntBASIC4.27□□□□□ -1.73
SEMA3DO95025 RPS26P3-201ENST00000470205 348 ntBASIC4.27□□□□□ -1.73
SEMA3DO95025 S100A11P1-201ENST00000477525 312 ntBASIC4.27□□□□□ -1.73
SEMA3DO95025 AC090543.2-201ENST00000483963 348 ntBASIC4.27□□□□□ -1.73
SEMA3DO95025 AC004057.1-201ENST00000485827 348 ntBASIC4.27□□□□□ -1.73
SEMA3DO95025 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.27□□□□□ -1.73
SEMA3DO95025 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.27□□□□□ -1.73
SEMA3DO95025 AC090281.1-201ENST00000523019 276 ntBASIC4.27□□□□□ -1.73
SEMA3DO95025 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.27□□□□□ -1.73
SEMA3DO95025 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SEMA3DO95025 AP001781.1-201ENST00000530977 207 ntBASIC4.27□□□□□ -1.73
SEMA3DO95025 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.27□□□□□ -1.73
SEMA3DO95025 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.27□□□□□ -1.73
SEMA3DO95025 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.27□□□□□ -1.73
SEMA3DO95025 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.27□□□□□ -1.73
SEMA3DO95025 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.27□□□□□ -1.73
SEMA3DO95025 RPL23AP97-201ENST00000568955 471 ntBASIC4.27□□□□□ -1.73
SEMA3DO95025 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SEMA3DO95025 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.27□□□□□ -1.73
SEMA3DO95025 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.27□□□□□ -1.73
SEMA3DO95025 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.27□□□□□ -1.73
SEMA3DO95025 AL161616.1-201ENST00000611867 286 ntBASIC4.27□□□□□ -1.73
SEMA3DO95025 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.27□□□□□ -1.73
SEMA3DO95025 AC021106.3-201ENST00000623925 531 ntBASIC4.27□□□□□ -1.73
SEMA3DO95025 AC007546.2-201ENST00000623996 360 ntBASIC4.27□□□□□ -1.73
SEMA3DO95025 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SEMA3DO95025 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
SEMA3DO95025 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SEMA3DO95025 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SEMA3DO95025 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.27□□□□□ -1.73
SEMA3DO95025 AC114546.3-201ENST00000623582 1734 ntBASIC4.26□□□□□ -1.73
SEMA3DO95025 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
SEMA3DO95025 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SEMA3DO95025 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SEMA3DO95025 OR13C3-201ENST00000374781 1108 ntBASIC4.26□□□□□ -1.73
SEMA3DO95025 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.26□□□□□ -1.73
SEMA3DO95025 UQCRBP1-201ENST00000421129 336 ntBASIC4.26□□□□□ -1.73
SEMA3DO95025 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.26□□□□□ -1.73
SEMA3DO95025 SEC63P1-201ENST00000425785 1258 ntBASIC4.26□□□□□ -1.73
SEMA3DO95025 AP001324.1-201ENST00000428553 399 ntBASIC4.26□□□□□ -1.73
SEMA3DO95025 NDUFA5P1-201ENST00000433858 341 ntBASIC4.26□□□□□ -1.73
SEMA3DO95025 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.26□□□□□ -1.73
SEMA3DO95025 AC073264.2-201ENST00000448886 166 ntBASIC4.26□□□□□ -1.73
SEMA3DO95025 OR52Y1P-201ENST00000452418 828 ntBASIC4.26□□□□□ -1.73
SEMA3DO95025 AL354710.1-201ENST00000453641 246 ntBASIC4.26□□□□□ -1.73
SEMA3DO95025 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.26□□□□□ -1.73
SEMA3DO95025 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.26□□□□□ -1.73
SEMA3DO95025 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.26□□□□□ -1.73
SEMA3DO95025 AC018797.3-201ENST00000513388 1241 ntBASIC4.26□□□□□ -1.73
SEMA3DO95025 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.26□□□□□ -1.73
SEMA3DO95025 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.26□□□□□ -1.73
SEMA3DO95025 AC025423.2-201ENST00000537570 439 ntBASIC4.26□□□□□ -1.73
SEMA3DO95025 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.26□□□□□ -1.73
SEMA3DO95025 AC018552.3-201ENST00000567416 561 ntBASIC4.26□□□□□ -1.73
SEMA3DO95025 AC069061.3-201ENST00000582254 823 ntBASIC4.26□□□□□ -1.73
SEMA3DO95025 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.26□□□□□ -1.73
SEMA3DO95025 AL713998.2-201ENST00000604538 1198 ntBASIC4.26□□□□□ -1.73
SEMA3DO95025 AC024940.4-201ENST00000605507 246 ntBASIC4.26□□□□□ -1.73
SEMA3DO95025 SNORA35B-201ENST00000607417 129 ntBASIC4.26□□□□□ -1.73
SEMA3DO95025 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.26□□□□□ -1.73
SEMA3DO95025 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.26□□□□□ -1.73
SEMA3DO95025 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SEMA3DO95025 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.26□□□□□ -1.73
SEMA3DO95025 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SEMA3DO95025 OR56B2P-202ENST00000641377 2453 ntBASIC4.26□□□□□ -1.73
SEMA3DO95025 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SEMA3DO95025 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SEMA3DO95025 RNA5SP513-201ENST00000364648 118 ntBASIC4.25□□□□□ -1.73
SEMA3DO95025 RN7SKP167-201ENST00000411047 285 ntBASIC4.25□□□□□ -1.73
SEMA3DO95025 AL139128.1-201ENST00000413921 941 ntBASIC4.25□□□□□ -1.73
SEMA3DO95025 RPL6P29-201ENST00000414863 865 ntBASIC4.25□□□□□ -1.73
SEMA3DO95025 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.25□□□□□ -1.73
SEMA3DO95025 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.25□□□□□ -1.73
SEMA3DO95025 CYP1D1P-201ENST00000416662 1433 ntBASIC4.25□□□□□ -1.73
SEMA3DO95025 AC019050.1-201ENST00000418508 492 ntBASIC4.25□□□□□ -1.73
SEMA3DO95025 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.25□□□□□ -1.73
SEMA3DO95025 CENPIP1-201ENST00000425713 902 ntBASIC4.25□□□□□ -1.73
SEMA3DO95025 NPM1P26-201ENST00000426339 738 ntBASIC4.25□□□□□ -1.73
SEMA3DO95025 AL121578.1-201ENST00000428051 892 ntBASIC4.25□□□□□ -1.73
SEMA3DO95025 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.25□□□□□ -1.73
SEMA3DO95025 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.25□□□□□ -1.73
SEMA3DO95025 RPS6P12-201ENST00000432491 726 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms