Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RN7SL517P-201ENST00000462240 305 ntBASIC4.47□□□□□ -1.69
PRKNO60260 AC068587.2-201ENST00000478386 781 ntBASIC4.47□□□□□ -1.69
PRKNO60260 AC090686.1-201ENST00000481577 749 ntBASIC4.47□□□□□ -1.69
PRKNO60260 AC073073.1-201ENST00000493920 463 ntBASIC4.47□□□□□ -1.69
PRKNO60260 AC073358.1-201ENST00000505671 684 ntBASIC4.47□□□□□ -1.69
PRKNO60260 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.47□□□□□ -1.69
PRKNO60260 AC091868.1-201ENST00000508746 304 ntBASIC4.47□□□□□ -1.69
PRKNO60260 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PRKNO60260 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.47□□□□□ -1.69
PRKNO60260 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.47□□□□□ -1.69
PRKNO60260 RN7SKP276-201ENST00000516242 268 ntBASIC4.47□□□□□ -1.69
PRKNO60260 RNA5SP230-201ENST00000517039 122 ntBASIC4.47□□□□□ -1.69
PRKNO60260 RNU6-709P-201ENST00000517257 104 ntBASIC4.47□□□□□ -1.69
PRKNO60260 RPL23AP53-201ENST00000521854 457 ntBASIC4.47□□□□□ -1.69
PRKNO60260 AC109635.6-201ENST00000525487 1113 ntBASIC4.47□□□□□ -1.69
PRKNO60260 MTCYBP23-201ENST00000558717 1102 ntBASIC4.47□□□□□ -1.69
PRKNO60260 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.47□□□□□ -1.69
PRKNO60260 AC091042.1-201ENST00000579213 173 ntBASIC4.47□□□□□ -1.69
PRKNO60260 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.47□□□□□ -1.69
PRKNO60260 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.47□□□□□ -1.69
PRKNO60260 AL122125.1-201ENST00000616999 600 ntBASIC4.47□□□□□ -1.69
PRKNO60260 AC132825.7-201ENST00000638744 335 ntBASIC4.47□□□□□ -1.69
PRKNO60260 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.47□□□□□ -1.69
PRKNO60260 RLIMP2-201ENST00000427891 1563 ntBASIC4.47□□□□□ -1.69
PRKNO60260 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PRKNO60260 AL731532.2-201ENST00000623542 1953 ntBASIC4.47□□□□□ -1.69
PRKNO60260 SDAD1P1-202ENST00000524156 2051 ntBASIC4.47□□□□□ -1.69
PRKNO60260 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
PRKNO60260 AC011755.1-201ENST00000623763 2049 ntBASIC4.46□□□□□ -1.69
PRKNO60260 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.46□□□□□ -1.69
PRKNO60260 SMG1P4-204ENST00000523028 4131 ntBASIC4.46□□□□□ -1.69
PRKNO60260 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.46□□□□□ -1.69
PRKNO60260 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PRKNO60260 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
PRKNO60260 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PRKNO60260 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.46□□□□□ -1.7
PRKNO60260 AC093775.1-201ENST00000624154 1868 ntBASIC4.46□□□□□ -1.7
PRKNO60260 SOCS5P3-201ENST00000425115 1576 ntBASIC4.46□□□□□ -1.7
PRKNO60260 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.46□□□□□ -1.7
PRKNO60260 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PRKNO60260 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRKNO60260 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRKNO60260 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRKNO60260 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRKNO60260 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRKNO60260 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.46□□□□□ -1.7
PRKNO60260 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.46□□□□□ -1.7
PRKNO60260 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.46□□□□□ -1.7
PRKNO60260 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.46□□□□□ -1.7
PRKNO60260 AC104333.2-201ENST00000422630 192 ntBASIC4.46□□□□□ -1.7
PRKNO60260 OR5M12P-201ENST00000423388 929 ntBASIC4.46□□□□□ -1.7
PRKNO60260 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.46□□□□□ -1.7
PRKNO60260 NRBF2P3-201ENST00000432731 865 ntBASIC4.46□□□□□ -1.7
PRKNO60260 AL035458.1-201ENST00000433096 585 ntBASIC4.46□□□□□ -1.7
PRKNO60260 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.46□□□□□ -1.7
PRKNO60260 ELOCP13-201ENST00000443934 329 ntBASIC4.46□□□□□ -1.7
PRKNO60260 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.46□□□□□ -1.7
PRKNO60260 AL031313.1-201ENST00000448435 256 ntBASIC4.46□□□□□ -1.7
PRKNO60260 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.46□□□□□ -1.7
PRKNO60260 MTND2P8-201ENST00000450555 1025 ntBASIC4.46□□□□□ -1.7
PRKNO60260 CALM1P2-201ENST00000452941 448 ntBASIC4.46□□□□□ -1.7
PRKNO60260 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PRKNO60260 AC107015.1-201ENST00000466902 747 ntBASIC4.46□□□□□ -1.7
PRKNO60260 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.46□□□□□ -1.7
PRKNO60260 RPS27AP16-201ENST00000492222 470 ntBASIC4.46□□□□□ -1.7
PRKNO60260 RN7SL558P-201ENST00000497468 299 ntBASIC4.46□□□□□ -1.7
PRKNO60260 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.46□□□□□ -1.7
PRKNO60260 SCARNA22-201ENST00000503991 125 ntBASIC4.46□□□□□ -1.7
PRKNO60260 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.46□□□□□ -1.7
PRKNO60260 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.46□□□□□ -1.7
PRKNO60260 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.46□□□□□ -1.7
PRKNO60260 IGHV3-63-201ENST00000518422 341 ntBASIC4.46□□□□□ -1.7
PRKNO60260 AP001207.2-201ENST00000519490 539 ntBASIC4.46□□□□□ -1.7
PRKNO60260 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.46□□□□□ -1.7
PRKNO60260 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.46□□□□□ -1.7
PRKNO60260 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PRKNO60260 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.46□□□□□ -1.7
PRKNO60260 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.46□□□□□ -1.7
PRKNO60260 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.46□□□□□ -1.7
PRKNO60260 AL049830.4-201ENST00000555149 351 ntBASIC4.46□□□□□ -1.7
PRKNO60260 AL132857.1-201ENST00000555180 708 ntBASIC4.46□□□□□ -1.7
PRKNO60260 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.46□□□□□ -1.7
PRKNO60260 AC009852.2-201ENST00000567898 485 ntBASIC4.46□□□□□ -1.7
PRKNO60260 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.46□□□□□ -1.7
PRKNO60260 RN7SL802P-201ENST00000577858 299 ntBASIC4.46□□□□□ -1.7
PRKNO60260 MIR5699-201ENST00000578903 90 ntBASIC4.46□□□□□ -1.7
PRKNO60260 SNORA74C-1-201ENST00000580726 201 ntBASIC4.46□□□□□ -1.7
PRKNO60260 MIR4660-201ENST00000583549 74 ntBASIC4.46□□□□□ -1.7
PRKNO60260 RN7SL622P-201ENST00000585292 275 ntBASIC4.46□□□□□ -1.7
PRKNO60260 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.46□□□□□ -1.7
PRKNO60260 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.46□□□□□ -1.7
PRKNO60260 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.46□□□□□ -1.7
PRKNO60260 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.46□□□□□ -1.7
PRKNO60260 AL512782.1-201ENST00000603093 364 ntBASIC4.46□□□□□ -1.7
PRKNO60260 AC087283.1-201ENST00000604029 1074 ntBASIC4.46□□□□□ -1.7
PRKNO60260 AL160237.3-201ENST00000604114 1013 ntBASIC4.46□□□□□ -1.7
PRKNO60260 AC098935.2-201ENST00000604222 466 ntBASIC4.46□□□□□ -1.7
PRKNO60260 AL121932.1-201ENST00000605542 214 ntBASIC4.46□□□□□ -1.7
PRKNO60260 AC009974.1-201ENST00000608881 455 ntBASIC4.46□□□□□ -1.7
PRKNO60260 AC022079.2-201ENST00000619739 566 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms