Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.56□□□□□ -1.68
SSX4O60224 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SSX4O60224 AC008565.1-201ENST00000509046 885 ntBASIC4.56□□□□□ -1.68
SSX4O60224 TPT1P8-201ENST00000510120 555 ntBASIC4.56□□□□□ -1.68
SSX4O60224 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.56□□□□□ -1.68
SSX4O60224 CDH12P4-201ENST00000517835 295 ntBASIC4.56□□□□□ -1.68
SSX4O60224 CDH12P3-201ENST00000517935 295 ntBASIC4.56□□□□□ -1.68
SSX4O60224 CDH12P1-201ENST00000518435 295 ntBASIC4.56□□□□□ -1.68
SSX4O60224 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SSX4O60224 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.56□□□□□ -1.68
SSX4O60224 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.56□□□□□ -1.68
SSX4O60224 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.56□□□□□ -1.68
SSX4O60224 AC087283.1-201ENST00000604029 1074 ntBASIC4.56□□□□□ -1.68
SSX4O60224 AC011626.1-201ENST00000604710 562 ntBASIC4.56□□□□□ -1.68
SSX4O60224 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.56□□□□□ -1.68
SSX4O60224 AC026979.4-201ENST00000606555 645 ntBASIC4.56□□□□□ -1.68
SSX4O60224 AL121652.1-201ENST00000608851 448 ntBASIC4.56□□□□□ -1.68
SSX4O60224 AL049539.1-201ENST00000611964 459 ntBASIC4.56□□□□□ -1.68
SSX4O60224 AL121890.3-201ENST00000618494 516 ntBASIC4.56□□□□□ -1.68
SSX4O60224 AC090772.4-201ENST00000623599 362 ntBASIC4.56□□□□□ -1.68
SSX4O60224 AP001784.1-201ENST00000624107 428 ntBASIC4.56□□□□□ -1.68
SSX4O60224 AC073342.3-201ENST00000624211 193 ntBASIC4.56□□□□□ -1.68
SSX4O60224 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SSX4O60224 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SSX4O60224 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.56□□□□□ -1.68
SSX4O60224 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.56□□□□□ -1.68
SSX4O60224 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SSX4O60224 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSX4O60224 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SSX4O60224 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSX4O60224 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.56□□□□□ -1.68
SSX4O60224 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SSX4O60224 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.56□□□□□ -1.68
SSX4O60224 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SSX4O60224 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSX4O60224 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SSX4O60224 AC015813.6-201ENST00000624409 5808 ntBASIC4.55□□□□□ -1.68
SSX4O60224 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSX4O60224 AL627171.1-201ENST00000618845 1308 ntBASIC4.55□□□□□ -1.68
SSX4O60224 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.55□□□□□ -1.68
SSX4O60224 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SSX4O60224 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.55□□□□□ -1.68
SSX4O60224 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.55□□□□□ -1.68
SSX4O60224 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.55□□□□□ -1.68
SSX4O60224 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.55□□□□□ -1.68
SSX4O60224 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.55□□□□□ -1.68
SSX4O60224 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.55□□□□□ -1.68
SSX4O60224 AC092170.1-201ENST00000440211 356 ntBASIC4.55□□□□□ -1.68
SSX4O60224 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.55□□□□□ -1.68
SSX4O60224 PTMAP3-201ENST00000447474 330 ntBASIC4.55□□□□□ -1.68
SSX4O60224 AC108751.2-201ENST00000469993 231 ntBASIC4.55□□□□□ -1.68
SSX4O60224 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.55□□□□□ -1.68
SSX4O60224 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.55□□□□□ -1.68
SSX4O60224 RPS24P16-201ENST00000497294 392 ntBASIC4.55□□□□□ -1.68
SSX4O60224 PRELID3BP6-201ENST00000503839 571 ntBASIC4.55□□□□□ -1.68
SSX4O60224 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.55□□□□□ -1.68
SSX4O60224 RNU6-415P-201ENST00000516252 97 ntBASIC4.55□□□□□ -1.68
SSX4O60224 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.55□□□□□ -1.68
SSX4O60224 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.55□□□□□ -1.68
SSX4O60224 AC118942.1-201ENST00000529674 1035 ntBASIC4.55□□□□□ -1.68
SSX4O60224 AP004607.2-201ENST00000533949 322 ntBASIC4.55□□□□□ -1.68
SSX4O60224 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SSX4O60224 AC095057.3-201ENST00000567102 1157 ntBASIC4.55□□□□□ -1.68
SSX4O60224 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.55□□□□□ -1.68
SSX4O60224 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.55□□□□□ -1.68
SSX4O60224 AC245884.10-201ENST00000597355 337 ntBASIC4.55□□□□□ -1.68
SSX4O60224 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.55□□□□□ -1.68
SSX4O60224 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.55□□□□□ -1.68
SSX4O60224 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.55□□□□□ -1.68
SSX4O60224 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.55□□□□□ -1.68
SSX4O60224 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSX4O60224 uc_338.18-201ENST00000615451 175 ntBASIC4.55□□□□□ -1.68
SSX4O60224 AC084824.4-201ENST00000620106 731 ntBASIC4.55□□□□□ -1.68
SSX4O60224 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.55□□□□□ -1.68
SSX4O60224 LINC01808-202ENST00000641680 1116 ntBASIC4.55□□□□□ -1.68
SSX4O60224 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
SSX4O60224 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.55□□□□□ -1.68
SSX4O60224 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.55□□□□□ -1.68
SSX4O60224 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSX4O60224 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSX4O60224 SCN1A-220ENST00000641603 12506 ntBASIC4.55□□□□□ -1.68
SSX4O60224 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SSX4O60224 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SSX4O60224 AL133268.1-201ENST00000405676 1401 ntBASIC4.55□□□□□ -1.68
SSX4O60224 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.54□□□□□ -1.68
SSX4O60224 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.54□□□□□ -1.68
SSX4O60224 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSX4O60224 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSX4O60224 MTND4P31-201ENST00000425607 1343 ntBASIC4.54□□□□□ -1.68
SSX4O60224 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SSX4O60224 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SSX4O60224 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.54□□□□□ -1.68
SSX4O60224 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSX4O60224 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SSX4O60224 SNORA17.1-201ENST00000362945 126 ntBASIC4.54□□□□□ -1.68
SSX4O60224 RNU4-4P-201ENST00000364588 130 ntBASIC4.54□□□□□ -1.68
SSX4O60224 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SSX4O60224 MIR589-201ENST00000385238 99 ntBASIC4.54□□□□□ -1.68
SSX4O60224 MIR92A2-201ENST00000385299 75 ntBASIC4.54□□□□□ -1.68
SSX4O60224 SNORD96B-201ENST00000386148 79 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms