Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SMAD6O43541 RNU6-298P-201ENST00000390888 96 ntBASIC4.99□□□□□ -1.61
SMAD6O43541 AL035419.1-201ENST00000397037 564 ntBASIC4.99□□□□□ -1.61
SMAD6O43541 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.99□□□□□ -1.61
SMAD6O43541 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.99□□□□□ -1.61
SMAD6O43541 MTCO3P4-201ENST00000419236 787 ntBASIC4.99□□□□□ -1.61
SMAD6O43541 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.99□□□□□ -1.61
SMAD6O43541 USP9YP14-201ENST00000430663 563 ntBASIC4.99□□□□□ -1.61
SMAD6O43541 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.99□□□□□ -1.61
SMAD6O43541 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.99□□□□□ -1.61
SMAD6O43541 AC073648.4-201ENST00000442655 781 ntBASIC4.99□□□□□ -1.61
SMAD6O43541 TXNP2-201ENST00000443918 295 ntBASIC4.99□□□□□ -1.61
SMAD6O43541 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.99□□□□□ -1.61
SMAD6O43541 AL035551.1-201ENST00000446931 348 ntBASIC4.99□□□□□ -1.61
SMAD6O43541 Z73417.1-201ENST00000447373 778 ntBASIC4.99□□□□□ -1.61
SMAD6O43541 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.99□□□□□ -1.61
SMAD6O43541 AC000111.2-201ENST00000448200 210 ntBASIC4.99□□□□□ -1.61
SMAD6O43541 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.99□□□□□ -1.61
SMAD6O43541 AC010733.1-201ENST00000451515 401 ntBASIC4.99□□□□□ -1.61
SMAD6O43541 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.99□□□□□ -1.61
SMAD6O43541 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.99□□□□□ -1.61
SMAD6O43541 HMGB1P38-201ENST00000490557 577 ntBASIC4.99□□□□□ -1.61
SMAD6O43541 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.99□□□□□ -1.61
SMAD6O43541 PPM1AP1-201ENST00000502740 1135 ntBASIC4.99□□□□□ -1.61
SMAD6O43541 AC121161.1-201ENST00000510606 652 ntBASIC4.99□□□□□ -1.61
SMAD6O43541 AC010486.3-201ENST00000511602 785 ntBASIC4.99□□□□□ -1.61
SMAD6O43541 RNU6-491P-201ENST00000516099 110 ntBASIC4.99□□□□□ -1.61
SMAD6O43541 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.99□□□□□ -1.61
SMAD6O43541 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.99□□□□□ -1.61
SMAD6O43541 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.99□□□□□ -1.61
SMAD6O43541 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.99□□□□□ -1.61
SMAD6O43541 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.99□□□□□ -1.61
SMAD6O43541 AGGF1P9-201ENST00000561884 913 ntBASIC4.99□□□□□ -1.61
SMAD6O43541 AC116553.2-201ENST00000564203 463 ntBASIC4.99□□□□□ -1.61
SMAD6O43541 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.99□□□□□ -1.61
SMAD6O43541 AC023825.1-201ENST00000566704 1030 ntBASIC4.99□□□□□ -1.61
SMAD6O43541 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.99□□□□□ -1.61
SMAD6O43541 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.99□□□□□ -1.61
SMAD6O43541 AC104687.2-201ENST00000604442 342 ntBASIC4.99□□□□□ -1.61
SMAD6O43541 AC009090.3-201ENST00000616553 565 ntBASIC4.99□□□□□ -1.61
SMAD6O43541 AL645927.2-201ENST00000618350 349 ntBASIC4.99□□□□□ -1.61
SMAD6O43541 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SMAD6O43541 AL022401.1-201ENST00000619498 108 ntBASIC4.99□□□□□ -1.61
SMAD6O43541 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.99□□□□□ -1.61
SMAD6O43541 AC019206.1-201ENST00000621938 425 ntBASIC4.99□□□□□ -1.61
SMAD6O43541 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.99□□□□□ -1.61
SMAD6O43541 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SMAD6O43541 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.99□□□□□ -1.61
SMAD6O43541 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
SMAD6O43541 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SMAD6O43541 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SMAD6O43541 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SMAD6O43541 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SMAD6O43541 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.99□□□□□ -1.61
SMAD6O43541 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SMAD6O43541 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SMAD6O43541 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
SMAD6O43541 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.99□□□□□ -1.61
SMAD6O43541 AC011447.7-201ENST00000624228 1590 ntBASIC4.99□□□□□ -1.61
SMAD6O43541 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.99□□□□□ -1.61
SMAD6O43541 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SMAD6O43541 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.98□□□□□ -1.61
SMAD6O43541 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.98□□□□□ -1.61
SMAD6O43541 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.98□□□□□ -1.61
SMAD6O43541 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SMAD6O43541 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SMAD6O43541 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
SMAD6O43541 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SMAD6O43541 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SMAD6O43541 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SMAD6O43541 SNORA73.1-201ENST00000363107 205 ntBASIC4.98□□□□□ -1.61
SMAD6O43541 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
SMAD6O43541 SNORD116-8-201ENST00000384365 95 ntBASIC4.98□□□□□ -1.61
SMAD6O43541 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SMAD6O43541 SKINT1L-201ENST00000401057 817 ntBASIC4.98□□□□□ -1.61
SMAD6O43541 AC241520.1-201ENST00000422654 1099 ntBASIC4.98□□□□□ -1.61
SMAD6O43541 AC007559.1-201ENST00000428736 355 ntBASIC4.98□□□□□ -1.61
SMAD6O43541 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SMAD6O43541 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.98□□□□□ -1.61
SMAD6O43541 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.98□□□□□ -1.61
SMAD6O43541 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.98□□□□□ -1.61
SMAD6O43541 MTND1P29-201ENST00000448112 647 ntBASIC4.98□□□□□ -1.61
SMAD6O43541 AC234781.3-201ENST00000452540 973 ntBASIC4.98□□□□□ -1.61
SMAD6O43541 ART2BP-201ENST00000453501 499 ntBASIC4.98□□□□□ -1.61
SMAD6O43541 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.98□□□□□ -1.61
SMAD6O43541 AC245028.2-201ENST00000458673 253 ntBASIC4.98□□□□□ -1.61
SMAD6O43541 AC010468.1-201ENST00000461022 817 ntBASIC4.98□□□□□ -1.61
SMAD6O43541 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.98□□□□□ -1.61
SMAD6O43541 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.98□□□□□ -1.61
SMAD6O43541 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.98□□□□□ -1.61
SMAD6O43541 AC004263.1-201ENST00000479327 332 ntBASIC4.98□□□□□ -1.61
SMAD6O43541 AC069304.1-201ENST00000491593 704 ntBASIC4.98□□□□□ -1.61
SMAD6O43541 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SMAD6O43541 PCNAP1-201ENST00000505363 709 ntBASIC4.98□□□□□ -1.61
SMAD6O43541 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.98□□□□□ -1.61
SMAD6O43541 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.98□□□□□ -1.61
SMAD6O43541 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.98□□□□□ -1.61
SMAD6O43541 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.98□□□□□ -1.61
SMAD6O43541 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.98□□□□□ -1.61
SMAD6O43541 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms