Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 ACTR3P2-201ENST00000439585 1257 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 TCEA1P3-201ENST00000443005 880 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.32□□□□□ -1.56
PHGDHO43175 COX6CP18-201ENST00000448769 222 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 AL133217.1-201ENST00000450980 425 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 RPL10P17-201ENST00000453852 316 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 NDUFA5P5-201ENST00000468361 342 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 AC094085.1-201ENST00000468914 584 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 RPL7P6-201ENST00000480903 738 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 COX6B1P2-201ENST00000489624 230 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 RPL5P23-201ENST00000496040 868 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PHGDHO43175 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PHGDHO43175 AC011411.1-201ENST00000509592 876 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 MRPS33P3-201ENST00000513456 322 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 RNU6-1129P-201ENST00000515964 104 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 SCARNA16.4-201ENST00000516956 187 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 RN7SKP99-201ENST00000517028 307 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.32□□□□□ -1.56
PHGDHO43175 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.32□□□□□ -1.56
PHGDHO43175 AC027369.5-201ENST00000533838 755 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.32□□□□□ -1.56
PHGDHO43175 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PHGDHO43175 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.32□□□□□ -1.56
PHGDHO43175 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.32□□□□□ -1.56
PHGDHO43175 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.32□□□□□ -1.56
PHGDHO43175 AL132657.2-201ENST00000564417 358 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 RN7SL356P-201ENST00000582228 248 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.32□□□□□ -1.56
PHGDHO43175 AC091488.1-201ENST00000604239 660 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 AL451074.6-201ENST00000608512 729 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PHGDHO43175 AC091932.2-201ENST00000623014 291 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 AC067852.7-201ENST00000623270 535 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 AC026422.1-201ENST00000623961 452 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PHGDHO43175 ADAM5-202ENST00000399789 1942 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PHGDHO43175 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.32□□□□□ -1.56
PHGDHO43175 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.32□□□□□ -1.56
PHGDHO43175 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PHGDHO43175 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PHGDHO43175 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PHGDHO43175 OR13C1P-202ENST00000641378 2919 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.31□□□□□ -1.56
PHGDHO43175 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.31□□□□□ -1.56
PHGDHO43175 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
PHGDHO43175 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.31□□□□□ -1.56
PHGDHO43175 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.31□□□□□ -1.56
PHGDHO43175 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PHGDHO43175 RNU1-19P-201ENST00000363306 165 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 RNU4-2-201ENST00000365668 141 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PHGDHO43175 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.31□□□□□ -1.56
PHGDHO43175 MFSD13B-201ENST00000420133 1290 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.31□□□□□ -1.56
PHGDHO43175 IPPKP1-201ENST00000422501 768 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 SRSF1P1-201ENST00000424058 520 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.31□□□□□ -1.56
PHGDHO43175 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.31□□□□□ -1.56
PHGDHO43175 NPM1P24-201ENST00000428039 894 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 RPL12P17-201ENST00000432393 498 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 RPS26P40-201ENST00000435209 294 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 RPL12P18-201ENST00000437175 325 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.31□□□□□ -1.56
PHGDHO43175 ELOCP10-201ENST00000440624 327 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 MTND3P1-201ENST00000441336 220 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 AC004865.1-201ENST00000442276 1003 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.31□□□□□ -1.56
PHGDHO43175 RPL7P59-201ENST00000447700 943 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.31□□□□□ -1.56
PHGDHO43175 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.31□□□□□ -1.56
PHGDHO43175 PNPLA4P1-201ENST00000458328 305 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.31□□□□□ -1.56
PHGDHO43175 BET1P1-201ENST00000482276 359 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.31□□□□□ -1.56
PHGDHO43175 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.31□□□□□ -1.56
PHGDHO43175 AC105313.1-201ENST00000509121 353 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 AC008885.2-201ENST00000509506 930 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 AC016559.2-201ENST00000510759 359 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.31□□□□□ -1.56
PHGDHO43175 AC098976.1-201ENST00000513014 541 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.31□□□□□ -1.56
PHGDHO43175 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.31□□□□□ -1.56
PHGDHO43175 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.31□□□□□ -1.56
PHGDHO43175 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.31□□□□□ -1.56
PHGDHO43175 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PHGDHO43175 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.31□□□□□ -1.56
PHGDHO43175 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.31□□□□□ -1.56
PHGDHO43175 LSM3P2-201ENST00000551246 273 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.31□□□□□ -1.56
PHGDHO43175 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.31□□□□□ -1.56
PHGDHO43175 DUXAP1-201ENST00000556632 463 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.31□□□□□ -1.56
PHGDHO43175 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.31□□□□□ -1.56
PHGDHO43175 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.31□□□□□ -1.56
PHGDHO43175 AL031281.1-201ENST00000604049 488 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 ELOCP34-201ENST00000604436 327 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 AL158042.1-201ENST00000605338 460 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms