Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SLC28A1O00337 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SLC28A1O00337 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SLC28A1O00337 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SLC28A1O00337 GTF2H2B-203ENST00000508065 1432 ntBASIC4.46□□□□□ -1.7
SLC28A1O00337 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SLC28A1O00337 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.45□□□□□ -1.7
SLC28A1O00337 C4BPAP1-201ENST00000415474 1893 ntBASIC4.45□□□□□ -1.7
SLC28A1O00337 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SLC28A1O00337 AC006971.1-201ENST00000407916 4486 ntBASIC4.45□□□□□ -1.7
SLC28A1O00337 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SLC28A1O00337 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.45□□□□□ -1.7
SLC28A1O00337 IGKV7-3-201ENST00000357453 298 ntBASIC4.45□□□□□ -1.7
SLC28A1O00337 RNU1-94P-201ENST00000362627 173 ntBASIC4.45□□□□□ -1.7
SLC28A1O00337 SNORA51.1-201ENST00000363243 140 ntBASIC4.45□□□□□ -1.7
SLC28A1O00337 RNA5SP507-201ENST00000363603 121 ntBASIC4.45□□□□□ -1.7
SLC28A1O00337 SNORA74A-201ENST00000364089 198 ntBASIC4.45□□□□□ -1.7
SLC28A1O00337 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SLC28A1O00337 HMGB1P13-201ENST00000406019 642 ntBASIC4.45□□□□□ -1.7
SLC28A1O00337 AL512430.2-201ENST00000406786 339 ntBASIC4.45□□□□□ -1.7
SLC28A1O00337 XKRYP4-201ENST00000414395 483 ntBASIC4.45□□□□□ -1.7
SLC28A1O00337 MTCO3P4-201ENST00000419236 787 ntBASIC4.45□□□□□ -1.7
SLC28A1O00337 RPS24P8-201ENST00000431490 402 ntBASIC4.45□□□□□ -1.7
SLC28A1O00337 AL031663.1-201ENST00000437445 219 ntBASIC4.45□□□□□ -1.7
SLC28A1O00337 RPL7L1P1-201ENST00000448259 785 ntBASIC4.45□□□□□ -1.7
SLC28A1O00337 XKRYP5-201ENST00000449659 483 ntBASIC4.45□□□□□ -1.7
SLC28A1O00337 AL935212.3-201ENST00000450729 284 ntBASIC4.45□□□□□ -1.7
SLC28A1O00337 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.45□□□□□ -1.7
SLC28A1O00337 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SLC28A1O00337 ISCUP1-201ENST00000454451 448 ntBASIC4.45□□□□□ -1.7
SLC28A1O00337 NIP7P2-201ENST00000485801 544 ntBASIC4.45□□□□□ -1.7
SLC28A1O00337 AC093763.2-201ENST00000505334 1223 ntBASIC4.45□□□□□ -1.7
SLC28A1O00337 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.45□□□□□ -1.7
SLC28A1O00337 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.45□□□□□ -1.7
SLC28A1O00337 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.45□□□□□ -1.7
SLC28A1O00337 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.45□□□□□ -1.7
SLC28A1O00337 HMGN2P6-201ENST00000551091 273 ntBASIC4.45□□□□□ -1.7
SLC28A1O00337 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.45□□□□□ -1.7
SLC28A1O00337 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.45□□□□□ -1.7
SLC28A1O00337 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.45□□□□□ -1.7
SLC28A1O00337 EDDM3DP-201ENST00000554692 434 ntBASIC4.45□□□□□ -1.7
SLC28A1O00337 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.45□□□□□ -1.7
SLC28A1O00337 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.45□□□□□ -1.7
SLC28A1O00337 AC025918.2-201ENST00000558683 763 ntBASIC4.45□□□□□ -1.7
SLC28A1O00337 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.45□□□□□ -1.7
SLC28A1O00337 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.45□□□□□ -1.7
SLC28A1O00337 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
SLC28A1O00337 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SLC28A1O00337 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SLC28A1O00337 AL391684.1-202ENST00000641293 1636 ntBASIC4.45□□□□□ -1.7
SLC28A1O00337 AL451142.2-201ENST00000429076 2090 ntBASIC4.45□□□□□ -1.7
SLC28A1O00337 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SLC28A1O00337 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.45□□□□□ -1.7
SLC28A1O00337 AC135352.1-201ENST00000506173 1418 ntBASIC4.45□□□□□ -1.7
SLC28A1O00337 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SLC28A1O00337 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
SLC28A1O00337 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
SLC28A1O00337 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
SLC28A1O00337 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
SLC28A1O00337 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SLC28A1O00337 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SLC28A1O00337 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.44□□□□□ -1.7
SLC28A1O00337 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SLC28A1O00337 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.44□□□□□ -1.7
SLC28A1O00337 AC011155.1-201ENST00000316512 456 ntBASIC4.44□□□□□ -1.7
SLC28A1O00337 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SLC28A1O00337 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
SLC28A1O00337 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SLC28A1O00337 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.44□□□□□ -1.7
SLC28A1O00337 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SLC28A1O00337 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.44□□□□□ -1.7
SLC28A1O00337 MIR142-201ENST00000384835 87 ntBASIC4.44□□□□□ -1.7
SLC28A1O00337 HDGFP1-201ENST00000405943 252 ntBASIC4.44□□□□□ -1.7
SLC28A1O00337 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.44□□□□□ -1.7
SLC28A1O00337 TATDN1P1-201ENST00000414123 891 ntBASIC4.44□□□□□ -1.7
SLC28A1O00337 AC140479.3-201ENST00000418944 1126 ntBASIC4.44□□□□□ -1.7
SLC28A1O00337 PDSS1P1-201ENST00000422953 1114 ntBASIC4.44□□□□□ -1.7
SLC28A1O00337 AL158073.1-201ENST00000426848 1104 ntBASIC4.44□□□□□ -1.7
SLC28A1O00337 NPM1P24-201ENST00000428039 894 ntBASIC4.44□□□□□ -1.7
SLC28A1O00337 MTATP6P11-201ENST00000428071 670 ntBASIC4.44□□□□□ -1.7
SLC28A1O00337 AC073508.1-201ENST00000428866 656 ntBASIC4.44□□□□□ -1.7
SLC28A1O00337 AC023141.6-201ENST00000429418 337 ntBASIC4.44□□□□□ -1.7
SLC28A1O00337 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.44□□□□□ -1.7
SLC28A1O00337 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.44□□□□□ -1.7
SLC28A1O00337 RPL12P46-201ENST00000436610 195 ntBASIC4.44□□□□□ -1.7
SLC28A1O00337 CBX1P4-201ENST00000439415 457 ntBASIC4.44□□□□□ -1.7
SLC28A1O00337 MED6P1-201ENST00000439659 713 ntBASIC4.44□□□□□ -1.7
SLC28A1O00337 MTCYBP21-201ENST00000443300 1113 ntBASIC4.44□□□□□ -1.7
SLC28A1O00337 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.44□□□□□ -1.7
SLC28A1O00337 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.44□□□□□ -1.7
SLC28A1O00337 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.44□□□□□ -1.7
SLC28A1O00337 PPIAP21-201ENST00000464473 501 ntBASIC4.44□□□□□ -1.7
SLC28A1O00337 NPM1P17-201ENST00000479221 602 ntBASIC4.44□□□□□ -1.7
SLC28A1O00337 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.44□□□□□ -1.7
SLC28A1O00337 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.44□□□□□ -1.7
SLC28A1O00337 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.44□□□□□ -1.7
SLC28A1O00337 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.44□□□□□ -1.7
SLC28A1O00337 AC021006.3-201ENST00000530771 192 ntBASIC4.44□□□□□ -1.7
SLC28A1O00337 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.44□□□□□ -1.7
SLC28A1O00337 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms