Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL158211.2-201ENST00000607282 395 ntBASIC4.82□□□□□ -1.64
CCDC188H7C350 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC188H7C350 FAM27B-201ENST00000610601 213 ntBASIC4.82□□□□□ -1.64
CCDC188H7C350 AC009237.17-201ENST00000618111 748 ntBASIC4.82□□□□□ -1.64
CCDC188H7C350 AC091905.2-201ENST00000623143 306 ntBASIC4.82□□□□□ -1.64
CCDC188H7C350 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.82□□□□□ -1.64
CCDC188H7C350 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC188H7C350 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CCDC188H7C350 NCLP2-201ENST00000416078 1462 ntBASIC4.81□□□□□ -1.64
CCDC188H7C350 AL442639.1-201ENST00000625030 1899 ntBASIC4.81□□□□□ -1.64
CCDC188H7C350 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CCDC188H7C350 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC188H7C350 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC188H7C350 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
CCDC188H7C350 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC188H7C350 RNU1-44P-201ENST00000384453 163 ntBASIC4.81□□□□□ -1.64
CCDC188H7C350 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC188H7C350 PTGES3P2-201ENST00000407942 482 ntBASIC4.81□□□□□ -1.64
CCDC188H7C350 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC188H7C350 AP000357.1-201ENST00000409926 1165 ntBASIC4.81□□□□□ -1.64
CCDC188H7C350 GSTM3P2-201ENST00000412746 530 ntBASIC4.81□□□□□ -1.64
CCDC188H7C350 AL591848.1-201ENST00000413092 322 ntBASIC4.81□□□□□ -1.64
CCDC188H7C350 LINC01347-201ENST00000417964 355 ntBASIC4.81□□□□□ -1.64
CCDC188H7C350 AC099336.2-201ENST00000422457 254 ntBASIC4.81□□□□□ -1.64
CCDC188H7C350 CENPIP1-201ENST00000425713 902 ntBASIC4.81□□□□□ -1.64
CCDC188H7C350 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC188H7C350 AC011753.3-201ENST00000443436 406 ntBASIC4.81□□□□□ -1.64
CCDC188H7C350 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.81□□□□□ -1.64
CCDC188H7C350 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC188H7C350 AC099560.2-201ENST00000457554 255 ntBASIC4.81□□□□□ -1.64
CCDC188H7C350 RN7SL172P-201ENST00000460535 303 ntBASIC4.81□□□□□ -1.64
CCDC188H7C350 PPIAP21-201ENST00000464473 501 ntBASIC4.81□□□□□ -1.64
CCDC188H7C350 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC188H7C350 RN7SL177P-201ENST00000476596 299 ntBASIC4.81□□□□□ -1.64
CCDC188H7C350 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC188H7C350 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC188H7C350 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC188H7C350 AC098799.3-201ENST00000506095 438 ntBASIC4.81□□□□□ -1.64
CCDC188H7C350 AC015795.1-201ENST00000513669 327 ntBASIC4.81□□□□□ -1.64
CCDC188H7C350 RNU6-347P-201ENST00000516658 105 ntBASIC4.81□□□□□ -1.64
CCDC188H7C350 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC188H7C350 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC188H7C350 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC188H7C350 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC188H7C350 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC188H7C350 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC188H7C350 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC188H7C350 AP002360.3-201ENST00000607673 710 ntBASIC4.81□□□□□ -1.64
CCDC188H7C350 AP001033.2-201ENST00000609701 1003 ntBASIC4.81□□□□□ -1.64
CCDC188H7C350 AC016957.2-201ENST00000616998 848 ntBASIC4.81□□□□□ -1.64
CCDC188H7C350 AC116563.2-201ENST00000624751 535 ntBASIC4.81□□□□□ -1.64
CCDC188H7C350 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC188H7C350 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC188H7C350 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCDC188H7C350 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC188H7C350 MTND5P11-201ENST00000511037 1812 ntBASIC4.81□□□□□ -1.64
CCDC188H7C350 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CCDC188H7C350 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC188H7C350 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC188H7C350 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC188H7C350 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC188H7C350 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC188H7C350 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CCDC188H7C350 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC188H7C350 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC188H7C350 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC188H7C350 RNU6-317P-201ENST00000384031 107 ntBASIC4.8□□□□□ -1.64
CCDC188H7C350 U3.25-201ENST00000391209 220 ntBASIC4.8□□□□□ -1.64
CCDC188H7C350 VN1R8P-201ENST00000407739 893 ntBASIC4.8□□□□□ -1.64
CCDC188H7C350 RNU6-603P-201ENST00000411403 107 ntBASIC4.8□□□□□ -1.64
CCDC188H7C350 AC062016.2-201ENST00000420950 676 ntBASIC4.8□□□□□ -1.64
CCDC188H7C350 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC188H7C350 CBX1P4-201ENST00000439415 457 ntBASIC4.8□□□□□ -1.64
CCDC188H7C350 H2AFZP5-201ENST00000446960 382 ntBASIC4.8□□□□□ -1.64
CCDC188H7C350 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC188H7C350 AL935212.3-201ENST00000450729 284 ntBASIC4.8□□□□□ -1.64
CCDC188H7C350 EIF4A1P11-201ENST00000451239 222 ntBASIC4.8□□□□□ -1.64
CCDC188H7C350 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC188H7C350 AURKAPS2-201ENST00000454983 333 ntBASIC4.8□□□□□ -1.64
CCDC188H7C350 AC006967.1-201ENST00000467608 589 ntBASIC4.8□□□□□ -1.64
CCDC188H7C350 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC188H7C350 AC002456.2-201ENST00000509356 380 ntBASIC4.8□□□□□ -1.64
CCDC188H7C350 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC188H7C350 AC004980.4-201ENST00000513375 203 ntBASIC4.8□□□□□ -1.64
CCDC188H7C350 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC188H7C350 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC188H7C350 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.8□□□□□ -1.64
CCDC188H7C350 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC188H7C350 AC022832.1-201ENST00000530718 645 ntBASIC4.8□□□□□ -1.64
CCDC188H7C350 AC022882.1-201ENST00000532142 501 ntBASIC4.8□□□□□ -1.64
CCDC188H7C350 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC188H7C350 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC188H7C350 AC007225.2-201ENST00000562529 256 ntBASIC4.8□□□□□ -1.64
CCDC188H7C350 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC188H7C350 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC188H7C350 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC188H7C350 VN1R84P-201ENST00000593697 235 ntBASIC4.8□□□□□ -1.64
CCDC188H7C350 BNIP3P32-201ENST00000600015 554 ntBASIC4.8□□□□□ -1.64
CCDC188H7C350 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.8□□□□□ -1.64
CCDC188H7C350 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms